Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 6.1e-36 153.7 81 100.0
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 6.1e-36 153.7 81 100.0
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 7.8e-31 136.7 88 87.5
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 7.8e-31 136.7 88 87.5
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 7.8e-31 136.7 88 87.5
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 7.8e-31 136.7 88 87.5
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 7.8e-31 136.7 88 87.5
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 3.8e-30 134.4 88 86.4
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 3.8e-30 134.4 88 86.4
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 3.8e-30 134.4 88 86.4
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 3.8e-30 134.4 88 86.4
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 3.8e-30 134.4 88 86.4
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 1.5e-29 132.5 88 81.8
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.2e-28 129.4 86 83.7
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.2e-28 129.4 88 81.8
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 2.8e-28 128.3 85 82.4
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 2.8e-28 128.3 85 82.4
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 3.6e-28 127.9 85 82.4
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 6.1e-28 127.1 85 81.2
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 6.1e-28 127.1 85 81.2
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 6.1e-28 127.1 85 81.2
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 8.0e-28 126.7 84 81.0
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 8.0e-28 126.7 85 81.2
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.0e-27 126.3 85 80.0
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 1.0e-27 126.3 85 81.2
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.4e-27 125.9 83 81.9
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 1.8e-27 125.6 85 80.0
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 1.8e-27 125.6 82 82.9
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.8e-27 125.6 82 81.7
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 1.8e-27 125.6 85 81.2
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.3e-27 125.2 82 80.5
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 2.3e-27 125.2 83 80.7
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 2.3e-27 125.2 85 81.2
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 2.3e-27 125.2 83 80.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.3e-27 125.2 85 81.2
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 2.3e-27 125.2 85 80.0
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 3.0e-27 124.8 85 80.0
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 3.0e-27 124.8 85 80.0
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 3.0e-27 124.8 85 80.0
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 3.0e-27 124.8 82 81.7
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 5.2e-27 124.0 85 78.8
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 5.2e-27 124.0 85 80.0
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 5.2e-27 124.0 85 78.8
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 5.2e-27 124.0 82 81.7
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 6.8e-27 123.6 85 78.8
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 6.8e-27 123.6 83 79.5
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 6.8e-27 123.6 83 79.5
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 6.8e-27 123.6 83 79.5
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 6.8e-27 123.6 83 79.5
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 6.8e-27 123.6 85 78.8
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 6.8e-27 123.6 83 79.5
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 6.8e-27 123.6 85 80.0
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.9e-27 123.2 82 80.5
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.9e-27 123.2 82 80.5
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 8.9e-27 123.2 85 78.8
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 8.9e-27 123.2 85 80.0
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 8.9e-27 123.2 83 78.3
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 1.2e-26 122.9 85 78.8
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.5e-26 122.5 85 78.8
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 1.5e-26 122.5 85 78.8
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.0e-26 122.1 85 77.6
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.0e-26 122.1 85 77.6
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 2.0e-26 122.1 85 76.5
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-26 122.1 85 75.3
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 2.0e-26 122.1 85 75.3
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.0e-26 122.1 82 80.5
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 2.6e-26 121.7 85 77.6
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 4.4e-26 120.9 80 78.8
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 5.7e-26 120.6 82 79.3
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 5.7e-26 120.6 82 79.3
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 9.8e-26 119.8 95 74.7
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 3.7e-25 117.9 82 75.6
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 3.7e-25 117.9 92 70.7
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 2.7e-23 111.7 74 85.1
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 2.7e-23 111.7 80 72.5
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 5.9e-23 110.5 82 70.7
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 3.9e-22 107.8 85 68.2
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 3.9e-22 107.8 73 75.3
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 1.5e-21 105.9 75 73.3
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 2.5e-21 105.1 82 70.7
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 2.5e-21 105.1 82 70.7
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 2.5e-21 105.1 82 70.7
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 4.3e-21 104.4 71 78.9
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 4.3e-21 104.4 82 70.7
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 7.3e-21 103.6 82 69.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 9.5e-21 103.2 82 69.5
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 1.6e-20 102.4 77 72.7
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 1.1e-19 99.8 72 75.0
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 3.1e-19 98.2 82 70.7
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 3.1e-19 98.2 85 64.7
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 8.9e-19 96.7 72 75.0
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 5.4e-16 87.4 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 3.5e-15 84.7 76 57.9
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 3.5e-15 84.7 70 65.7
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 1.0e-14 83.2 58 75.9
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 3.9e-14 81.3 46 91.3
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.1e-13 79.7 82 59.8
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 7.3e-13 77.0 76 56.6
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 6.8e-11 70.5 43 81.4
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 1.2e-10 69.7 43 76.7
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-08 63.2 49 69.4


User provided reference genes

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