Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 3.2e-273 944.5 479 100.0
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 3.2e-273 944.5 479 100.0
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 2.3e-263 911.8 479 96.5
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 4.0e-260 901.0 479 96.2
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 1.1e-257 892.9 479 95.2
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 1.5e-254 882.5 482 94.0
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.1e-244 849.7 479 91.0
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 4.6e-240 834.3 477 90.1
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 6.5e-234 813.9 464 90.1
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 2.1e-232 808.9 469 88.9
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.7e-232 808.5 471 88.7
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 6.7e-223 777.3 493 81.5
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 1.9e-217 759.2 471 82.6
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.2e-192 676.8 467 74.5
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 3.2e-185 652.1 464 72.8
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 4.0e-183 645.2 471 70.1
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 1.2e-182 643.7 463 70.4
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 6.3e-181 637.9 461 71.4
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 2.9e-178 629.0 471 70.1
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 1.1e-177 627.1 460 70.0
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 3.3e-177 625.5 469 69.3
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 3.3e-177 625.5 460 70.4
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 9.5e-177 624.0 457 71.1
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 2.1e-176 622.9 458 70.1
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 2.8e-176 622.5 446 72.2
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 3.6e-176 622.1 474 68.1
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 3.6e-176 622.1 464 69.0
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 6.1e-176 621.3 458 69.7
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 8.0e-176 620.9 452 70.4
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 1.0e-175 620.5 457 70.2
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 3.0e-175 619.0 464 69.0
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 3.0e-175 619.0 488 66.0
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 3.0e-175 619.0 452 69.7
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 5.2e-175 618.2 456 69.1
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 8.9e-175 617.5 464 69.4
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 2.6e-174 615.9 470 68.7
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 3.4e-174 615.5 468 67.7
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 7.5e-174 614.4 462 68.4
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 7.5e-174 614.4 458 69.9
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 9.8e-174 614.0 453 68.4
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 4.9e-173 611.7 468 68.2
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 6.3e-173 611.3 444 70.7
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.1e-172 610.5 461 70.5
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.4e-172 610.1 464 68.3
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 1.4e-172 610.1 455 68.8
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 2.4e-172 609.4 458 70.7
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 3.2e-172 609.0 457 68.5
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 9.2e-172 607.4 461 70.3
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 2.0e-171 606.3 459 67.8
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 3.5e-171 605.5 461 70.1
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 4.6e-171 605.1 461 67.5
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 3.9e-170 602.1 495 64.0
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 6.6e-170 601.3 456 68.2
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 2.5e-169 599.4 442 70.4
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 3.3e-169 599.0 463 68.0
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 7.3e-169 597.8 465 68.4
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.1e-168 596.3 465 68.2
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 2.1e-168 596.3 462 67.3
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 6.2e-168 594.7 463 68.0
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 6.2e-168 594.7 459 67.3
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 3.1e-167 592.4 450 68.2
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 6.8e-167 591.3 462 66.9
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.7e-165 586.6 465 67.3
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 2.9e-165 585.9 466 64.4
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 6.4e-165 584.7 466 64.6
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 1.1e-164 583.9 469 66.5
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 9.2e-164 580.9 465 66.0
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 2.3e-162 576.2 432 69.9
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 8.6e-162 574.3 459 65.6
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 4.7e-160 568.5 459 64.9
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.2e-158 563.9 424 70.3
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.1e-156 557.4 449 62.8
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 2.4e-156 556.2 450 63.6
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 4.3e-153 545.4 556 55.2
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 5.2e-151 538.5 440 64.3
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.5e-150 537.0 457 62.8
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 5.8e-150 535.0 458 62.9
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 6.4e-149 531.6 427 67.0
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 1.1e-148 530.8 454 60.4
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.2e-147 527.3 313 86.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.3e-146 523.9 442 63.3
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 1.9e-145 520.0 529 56.0
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 8.1e-144 514.6 472 56.1
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 6.8e-143 511.5 363 72.7
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 4.2e-140 502.3 457 59.3
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 2.1e-136 490.0 464 58.6
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 5.8e-134 481.9 464 58.8
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 7.6e-134 481.5 371 65.8
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 5.4e-132 475.3 493 57.6
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.9e-129 466.8 415 62.9
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.3e-129 465.7 375 65.9
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 5.6e-129 465.3 523 53.3
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 3.4e-126 456.1 463 55.3
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 5.5e-124 448.7 461 56.0
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 5.1e-122 442.2 342 67.0
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 8.1e-120 434.9 499 51.9
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 2.0e-118 430.3 359 63.8
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.2e-117 426.8 320 68.8
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.4e-116 424.1 455 54.1
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 2.1e-112 410.2 467 48.6
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 3.1e-111 406.4 327 64.2
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 2.0e-110 403.7 341 64.2
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 1.9e-108 397.1 465 47.3
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 2.5e-108 396.7 445 51.9
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 1.5e-102 377.5 269 71.7
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 7.7e-102 375.2 439 49.9
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 5.1e-98 362.5 462 45.7
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 3.4e-94 349.7 469 45.6
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 2.5e-92 343.6 305 56.4
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 5.5e-92 342.4 265 67.2
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 2.5e-84 317.0 364 48.4
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 2.6e-81 307.0 303 57.1
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 1.1e-71 275.0 284 54.9
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 8.0e-67 258.8 757 28.8
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 8.6e-61 238.8 454 36.1
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 3.4e-57 226.9 429 37.5
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 7.0e-55 219.2 156 71.2
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 1.5e-41 174.9 100 87.0
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 6.4e-40 169.5 176 58.5
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.3e-40 169.1 154 57.8
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 1.2e-38 165.2 452 29.4
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 1.2e-35 155.2 117 72.6
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.9e-29 133.7 176 47.7
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 1.6e-27 128.3 524 26.3
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 4.9e-24 116.7 68 82.4
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 8.4e-24 115.9 90 62.2
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.9e-23 114.8 108 59.3
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 7.4e-12 76.3 161 29.8
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.6e-09 67.8 65 58.5
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 2.6e-09 67.8 113 41.6
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.6e-06 58.5 48 58.3


User provided reference genes

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