Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 8.0e-83 311.2 167 100.0
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 1.8e-82 310.1 167 99.4
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 4.2e-76 288.9 159 98.7
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 9.4e-76 287.7 170 94.1
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 2.1e-75 286.6 159 98.1
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 2.1e-75 286.6 159 98.1
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.2e-70 270.8 168 89.3
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 1.2e-70 270.8 168 89.3
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.9e-68 263.5 171 84.2
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 1.0e-66 257.7 168 87.5
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 1.4e-66 257.3 161 86.3
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 9.8e-65 251.1 166 82.5
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 1.3e-64 250.8 161 85.1
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 3.1e-63 246.1 157 86.6
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 3.1e-63 246.1 157 86.6
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 3.1e-63 246.1 157 86.6
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 2.0e-62 243.4 159 84.9
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 2.9e-61 239.6 167 81.4
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 2.3e-58 229.9 171 78.9
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 2.3e-58 229.9 158 82.9
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 1.5e-57 227.3 148 84.5
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 3.7e-56 222.6 154 81.2
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 8.3e-56 221.5 155 78.7
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 8.3e-56 221.5 155 78.1
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 7.0e-55 218.4 148 81.8
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 7.0e-55 218.4 155 79.4
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 7.0e-55 218.4 148 80.4
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 9.2e-55 218.0 153 77.1
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.2e-54 217.6 156 78.8
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 1.2e-54 217.6 156 78.8
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.6e-54 217.2 156 78.8
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 2.0e-54 216.9 148 80.4
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 2.7e-54 216.5 153 77.1
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 2.7e-54 216.5 145 82.1
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 2.7e-54 216.5 148 81.1
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 2.7e-54 216.5 152 78.3
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 2.7e-54 216.5 166 76.5
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 3.5e-54 216.1 156 78.2
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 3.5e-54 216.1 148 81.1
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 4.6e-54 215.7 155 78.7
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 6.0e-54 215.3 149 79.9
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 7.8e-54 214.9 145 81.4
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 1.0e-53 214.5 152 80.3
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 1.0e-53 214.5 150 80.0
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 1.3e-53 214.2 155 78.1
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 1.7e-53 213.8 136 83.1
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.3e-53 213.4 155 78.7
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 3.0e-53 213.0 160 75.6
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 3.0e-53 213.0 153 77.8
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 3.0e-53 213.0 137 83.9
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 3.0e-53 213.0 148 80.4
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 3.0e-53 213.0 148 80.4
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 3.0e-53 213.0 148 79.1
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 3.0e-53 213.0 156 76.3
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 3.9e-53 212.6 151 78.1
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 3.9e-53 212.6 151 78.1
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 3.9e-53 212.6 146 80.8
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 3.9e-53 212.6 156 76.3
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 5.0e-53 212.2 144 79.9
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 5.0e-53 212.2 148 78.4
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 8.6e-53 211.5 136 83.8
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 1.1e-52 211.1 137 82.5
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 1.1e-52 211.1 149 78.5
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.5e-52 210.7 159 74.2
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 1.5e-52 210.7 153 79.1
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 1.5e-52 210.7 135 83.7
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 1.5e-52 210.7 149 81.2
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.5e-52 209.9 167 73.1
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 2.5e-52 209.9 145 79.3
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 2.5e-52 209.9 152 79.6
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 3.3e-52 209.5 151 79.5
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 3.3e-52 209.5 164 73.8
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.3e-52 209.5 152 78.3
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.3e-52 209.5 152 78.3
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 3.3e-52 209.5 150 76.7
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 4.3e-52 209.1 150 76.7
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 4.3e-52 209.1 148 78.4
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 9.5e-52 208.0 145 78.6
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 9.5e-52 208.0 171 69.6
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 9.5e-52 208.0 144 79.9
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.2e-51 207.6 155 75.5
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 1.2e-51 207.6 148 77.0
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 1.6e-51 207.2 136 80.9
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 1.6e-51 207.2 150 76.0
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 2.1e-51 206.8 141 80.9
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 2.1e-51 206.8 157 75.2
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 2.8e-51 206.5 149 77.9
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 2.8e-51 206.5 168 70.8
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 2.8e-51 206.5 151 77.5
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 3.6e-51 206.1 149 77.2
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 3.6e-51 206.1 148 78.4
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 3.6e-51 206.1 151 76.2
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 4.7e-51 205.7 137 80.3
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 4.7e-51 205.7 150 78.7
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 4.7e-51 205.7 154 77.3
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 6.2e-51 205.3 153 76.5
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 6.2e-51 205.3 146 76.0
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 6.2e-51 205.3 151 76.2
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 8.0e-51 204.9 153 76.5
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 8.0e-51 204.9 140 78.6
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.1e-50 204.5 153 76.5
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 1.8e-50 203.8 167 71.3
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 2.3e-50 203.4 168 68.5
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 2.3e-50 203.4 168 72.0
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 3.1e-50 203.0 149 77.2
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 3.1e-50 203.0 153 75.8
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 4.0e-50 202.6 162 70.4
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 5.2e-50 202.2 155 74.2
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 5.2e-50 202.2 159 73.6
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 5.2e-50 202.2 149 76.5
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 6.8e-50 201.8 151 76.8
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 6.8e-50 201.8 149 75.8
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 6.8e-50 201.8 149 75.8
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 6.8e-50 201.8 153 77.1
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 6.8e-50 201.8 153 77.1
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 8.9e-50 201.4 149 73.8
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 2.6e-49 199.9 153 76.5
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 5.8e-49 198.7 133 80.5
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 7.5e-49 198.4 153 74.5
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.7e-48 197.2 141 79.4
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 2.9e-48 196.4 149 75.8
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 4.9e-48 195.7 149 75.2
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 4.9e-48 195.7 156 70.5
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 1.9e-47 193.7 148 74.3
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 5.4e-47 192.2 139 75.5
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 9.2e-47 191.4 155 71.0
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 4.6e-46 189.1 130 77.7
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 6.0e-46 188.7 148 72.3
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 7.8e-46 188.3 146 74.7
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 5.0e-45 185.7 130 76.9
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 6.6e-45 185.3 138 76.1
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 6.6e-45 185.3 130 76.2
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.8e-42 177.2 140 66.4
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.2e-41 174.5 135 69.6
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 4.6e-38 162.5 120 75.8
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 3.9e-37 159.5 126 70.6
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 5.1e-37 159.1 115 77.4
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 9.9e-33 144.8 111 68.5
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 1.3e-32 144.4 152 57.9
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 1.2e-30 137.9 128 59.4
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.1e-30 137.1 155 59.4
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 6.0e-30 135.6 109 67.9
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 1.9e-28 130.6 82 89.0
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 2.9e-24 116.7 113 60.2
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 3.8e-24 116.3 111 58.6
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 7.8e-22 108.6 151 49.0
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 3.0e-21 106.7 103 59.2
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 4.8e-19 99.4 67 83.6
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 4.8e-19 99.4 67 83.6
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.1e-18 98.2 87 66.7
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.6e-17 93.6 109 52.3
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 4.5e-17 92.8 153 48.4
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.4e-15 87.8 66 78.8
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 1.4e-15 87.8 72 68.1
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 9.3e-15 85.1 64 76.6
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 3.2e-07 60.1 51 51.0


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