Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA04t16615Z Brassica rapa HOM05D000496 ORTHO05D000411 7.9e-45 183.3 89 100.0
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-26 122.5 91 67.0
BcaNung04302 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-25 117.5 91 64.8
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-25 117.1 91 64.8
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-24 115.9 91 64.8
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-24 114.8 91 63.7
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 3.5e-24 114.8 90 66.7
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 4.5e-24 114.4 87 66.7
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-24 113.6 89 64.0
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-23 113.2 91 61.5
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-23 112.5 91 62.6
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-23 112.5 91 63.7
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 1.1e-22 109.8 91 60.4
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-22 109.4 70 72.9
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-22 109.4 91 60.4
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-22 109.4 91 61.5
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-22 108.6 91 59.3
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-22 108.2 91 61.5
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-22 108.2 91 61.5
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 3.2e-22 108.2 91 58.2
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-22 107.5 91 60.4
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-22 107.1 91 58.2
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-22 107.1 91 60.4
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-22 107.1 83 63.9
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-22 106.7 91 58.2
Thhalv10000620m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.4e-22 106.7 95 54.7
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-21 105.9 91 58.2
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 1.6e-21 105.9 91 58.2
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-21 105.5 91 60.4
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-21 105.1 91 60.4
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-21 104.8 91 58.2
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-21 104.8 91 62.6
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-21 104.8 91 59.3
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 3.6e-21 104.8 91 58.2
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 3.6e-21 104.8 91 59.3
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-21 104.4 91 57.1
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-21 103.6 91 59.3
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-20 102.8 91 58.2
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-20 102.1 77 66.2
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-20 102.1 78 62.8
Thhalv10005542m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.3e-20 102.1 93 58.1
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-20 101.7 91 54.9
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 4.0e-20 101.3 87 59.8
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 4.0e-20 101.3 87 59.8
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-20 100.9 91 53.8
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-20 100.1 91 57.1
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.8e-20 100.1 91 58.2
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-19 99.8 91 57.1
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-19 99.0 78 64.1
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 2.6e-19 98.6 91 58.2
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 2.6e-19 98.6 91 53.8
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 2.6e-19 98.6 91 53.8
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-19 97.8 95 52.6
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-19 97.4 91 52.7
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.8e-19 96.7 100 54.0
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.8e-19 96.7 100 54.0
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.8e-19 96.7 100 54.0
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-18 96.3 78 60.3
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-18 96.3 91 57.1
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-18 95.9 91 57.1
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-18 95.5 91 54.9
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-18 95.5 78 60.3
BcaC06g35999 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-18 95.1 91 53.8
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 3.7e-18 94.7 95 49.5
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-18 94.7 91 52.7
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-18 94.4 67 67.2
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 1.1e-17 93.2 58 75.9
BcaB07g31293 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-17 92.8 69 66.7
BcaC01g02265 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-17 92.4 78 59.0
BolC8t47690H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-17 92.4 91 50.5
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-17 92.0 71 60.6
Thhalv10027058m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.1e-17 91.7 89 53.9
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-17 91.3 91 50.5
BcaB04g17415 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-17 90.9 93 52.7
Thhalv10028246m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.0e-17 90.5 91 54.9
SpUn0002_0030 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.1e-17 90.1 91 51.6
Thhalv10002274m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-16 89.7 86 53.5
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-16 89.7 81 54.3
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-16 89.7 75 57.3
BcaC06g36324 Brassica carinata HOM05D000496 ORTHO05D027247 1.6e-16 89.4 91 54.9
BcaC08g46291 Brassica carinata HOM05D000496 ORTHO05D027247 1.6e-16 89.4 91 53.8
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 1.6e-16 89.4 91 50.5
Sp1g33610 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.0e-16 89.0 91 51.6
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-16 88.6 69 62.3
BcaB01g01299 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-16 88.2 91 53.8
BolC1t03568H Brassica oleracea HOM05D000496 ORTHO05D000411 3.5e-16 88.2 71 62.0
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.5e-16 88.2 93 50.5
BcaB04g17753 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-16 87.8 91 53.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-16 87.8 65 64.6
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-16 87.8 72 62.5
Sp4g07540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.5e-16 87.8 91 49.5
Sp5g18290 Schrenkiella parvula HOM05D008211 ORTHO05D000411 4.5e-16 87.8 93 49.5
Sp7g03480 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.5e-16 87.8 93 46.2
BcaB03g15279 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-16 87.4 91 53.8
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-16 87.4 67 61.2
Sp4g05320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.9e-16 87.4 91 48.4
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-16 87.0 91 51.6
BolC7t41547H Brassica oleracea HOM05D000496 ORTHO05D000411 7.7e-16 87.0 91 53.8
Sp3g28380 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.7e-16 87.0 93 50.5
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 1.0e-15 86.7 71 59.2
BcaB02g06959 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-15 86.3 91 49.5
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 1.3e-15 86.3 91 46.2
Sp3g23630 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.7e-15 85.9 95 45.3
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-15 85.5 84 56.0
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-15 85.5 93 49.5
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-15 85.5 93 45.2
BcaC04g21212 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 85.1 91 51.6
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 2.9e-15 85.1 93 46.2
Thhalv10005429m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.8e-15 84.7 73 57.5
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-15 84.7 91 49.5
Sp5g17960 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-15 84.7 91 46.2
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-15 84.3 68 60.3
BcaB05g24503 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-15 84.0 93 48.4
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 8.6e-15 83.6 91 47.3
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 8.6e-15 83.6 91 45.1
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 1.1e-14 83.2 91 46.2
Sp5g18410 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-14 83.2 88 50.0
Sp6g09290 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-14 82.4 91 48.4
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-14 82.4 93 46.2
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-14 82.0 79 51.9
BcaC02g09783 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-14 82.0 93 46.2
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-14 82.0 91 49.5
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-14 81.3 93 46.2
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 5.5e-14 80.9 91 47.3
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.2e-14 80.5 93 45.2
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.5e-14 80.1 87 43.7
BcaC06g35793 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 79.7 83 54.2
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.6e-13 79.3 74 59.5
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-13 79.0 49 73.5
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 2.8e-13 78.6 89 43.8
Carub.0008s0594 Capsella rubella HOM05D000496 ORTHO05D000411 2.8e-13 78.6 91 44.0
Thhalv10012328m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.8e-13 78.6 73 52.1
Sp1g31040 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.8e-13 78.6 71 53.5
Sp4g08700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.8e-13 78.6 71 56.3
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-13 78.2 62 61.3
Thhalv10003397m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.7e-13 77.8 69 55.1
Sp6g11020 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.7e-13 77.8 68 52.9
Sp7g09900 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.7e-13 77.8 93 46.2
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.1e-13 77.4 85 45.9
Sp7g07460 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.0e-12 76.6 71 52.1
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-12 76.3 93 45.2
BcaC09g49508 Brassica carinata HOM05D033252 ORTHO05D000411 1.8e-12 75.9 78 55.1
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.8e-12 75.9 69 50.7
Sp6g07640 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-12 75.5 73 52.1
Sp5g17180 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.0e-12 74.7 80 50.0
BcaC04g19439 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-12 73.6 65 53.8
Sp3g26540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.2e-11 73.2 69 50.7
SpUn0025_0070 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.2e-11 73.2 85 43.5
SpUn0257_0010 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.2e-11 73.2 85 43.5
BcaC02g08332 Brassica carinata HOM05D033252 ORTHO05D000411 2.0e-11 72.4 60 66.7
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-11 72.4 91 47.3
BcaC04g22246 Brassica carinata HOM05D033252 ORTHO05D000411 2.6e-11 72.0 60 66.7
BcaB06g27535 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-11 71.6 70 48.6
BcaC01g02090 Brassica carinata HOM05D010266 ORTHO05D000411 3.4e-11 71.6 84 48.8
Carub.0002s0991 Capsella rubella HOM05D000496 ORTHO05D000411 3.4e-11 71.6 69 50.7
Sp2g04370 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.4e-11 71.2 93 44.1
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.8e-11 70.1 62 54.8
BraA08t32350Z Brassica rapa HOM05D000496 ORTHO05D027404 1.3e-10 69.7 57 59.6
BolC1t03278H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-10 68.6 65 58.5
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.8e-10 68.6 52 63.5
Carub.0002s1000 Capsella rubella HOM05D000496 ORTHO05D000411 3.7e-10 68.2 69 46.4
C03p82040 Brassica napus HOM05D000496 ORTHO05D000411 8.3e-10 67.0 61 55.7
Thhalv10027529m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-09 66.6 57 54.4
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-09 63.9 58 56.9
Sp7g10820 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.0e-09 63.9 91 42.9
SpUn0001_0560 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.0e-09 63.9 61 49.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-08 62.4 84 44.0
Sp6g09170 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.9e-08 60.8 44 59.1
Sp6g12660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.9e-08 60.8 61 50.8
Thhalv10026902m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-07 59.3 46 60.9
BcaB02g10494 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 58.2 52 53.8
BcaC02g10030 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-07 57.8 83 42.2
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-07 57.4 67 50.7
AL1G24220 Arabidopsis lyrata HOM05D010764 ORTHO05D000411 8.6e-07 57.0 67 40.3
BcaC05g29417 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-07 57.0 67 43.3
AT5G40595 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 1.1e-06 56.6 71 42.3
BcaB08g35835 Brassica carinata HOM05D052729 ORTHO05D000411 1.5e-06 56.2 74 43.2
CARHR119160 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.5e-06 55.5 83 39.8
BcaB07g33722 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 55.1 70 42.9
Thhalv10009587m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.3e-06 55.1 91 38.5
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-06 54.7 76 39.5
Thhalv10003335m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-06 54.7 44 59.1
BcaB08g36396 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-06 54.3 74 45.9
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-06 54.3 76 40.8
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-06 54.3 67 43.3
C09p39390 Brassica napus HOM05D000496 ORTHO05D000411 5.6e-06 54.3 67 38.8
BolC9t56812H Brassica oleracea HOM05D000496 ORTHO05D000411 5.6e-06 54.3 67 38.8
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-06 53.9 44 56.8
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.3e-06 53.9 67 43.3
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.3e-06 53.9 44 59.1
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 9.5e-06 53.5 67 44.8


User provided reference genes

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