Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t08974Z Brassica rapa HOM05D007011 ORTHO05D008837 2.4e-133 478.8 232 100.0
C05p14820 Brassica napus HOM05D007011 ORTHO05D008837 4.2e-106 388.3 232 79.7
C01p11610 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-105 386.7 232 78.9
C05p32490 Brassica napus HOM05D007011 ORTHO05D008837 2.3e-104 382.5 231 78.4
BolC5t31983H Brassica oleracea HOM05D007011 ORTHO05D008837 2.3e-104 382.5 231 78.4
BolC8t48311H Brassica oleracea HOM05D007011 ORTHO05D008837 5.7e-103 377.9 232 76.3
BolC5t31113H Brassica oleracea HOM05D007011 ORTHO05D008837 7.5e-103 377.5 232 77.2
BcaC05g28767 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-102 375.6 239 77.0
BolC5t33294H Brassica oleracea HOM05D007011 ORTHO05D008837 2.8e-102 375.6 232 77.2
BolC3t21008H Brassica oleracea HOM05D007011 ORTHO05D008837 8.3e-102 374.0 232 76.3
C07p30430 Brassica napus HOM05D007011 ORTHO05D008837 5.4e-101 371.3 232 75.0
BcaC06g34312 Brassica carinata HOM05D007011 ORTHO05D008837 2.7e-100 369.0 232 74.1
C06p40070 Brassica napus HOM05D007011 ORTHO05D008837 2.3e-99 365.9 232 77.2
BcaC03g15015 Brassica carinata HOM05D007011 ORTHO05D008837 1.9e-98 362.8 227 75.8
C01p38480 Brassica napus HOM05D007011 ORTHO05D008837 1.9e-98 362.8 214 79.0
BolC8t48619H Brassica oleracea HOM05D007011 ORTHO05D008837 7.2e-98 360.9 220 75.5
BolC7t43583H Brassica oleracea HOM05D007011 ORTHO05D008837 9.8e-95 350.5 232 71.6
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 3.1e-93 345.5 232 69.4
BcaC08g45131 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-92 342.0 232 72.4
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 4.7e-89 331.6 232 67.7
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 4.4e-87 325.1 232 66.4
C08p05270 Brassica napus HOM05D007011 ORTHO05D008837 2.9e-86 322.4 232 65.5
C06p20850 Brassica napus HOM05D007011 ORTHO05D008837 3.5e-84 315.5 224 66.1
BolC6t37272H Brassica oleracea HOM05D007011 ORTHO05D008837 3.5e-84 315.5 224 66.1
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-83 312.0 232 67.7
BraA08t33780Z Brassica rapa HOM05D007011 ORTHO05D008837 1.9e-74 283.1 231 58.9
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 8.1e-73 277.7 218 63.3
BcaC07g39807 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-53 214.2 202 55.0
BcaC01g06815 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-51 205.7 218 50.0
C03p75650 Brassica napus HOM05D007011 ORTHO05D008837 2.5e-50 203.0 121 75.2
BolC5t31106H Brassica oleracea HOM05D007011 ORTHO05D008837 4.3e-50 202.2 122 75.4
BcaC01g00089 Brassica carinata HOM05D007011 ORTHO05D008837 7.3e-50 201.4 121 74.4
BcaC05g25371 Brassica carinata HOM05D007011 ORTHO05D008837 1.4e-48 197.2 119 73.9
BcaC08g44613 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-48 196.8 202 51.0
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 4.0e-48 195.7 122 74.6
BcaC04g18660 Brassica carinata HOM05D007011 ORTHO05D008837 5.8e-47 191.8 121 73.6
BcaNung02468 Brassica carinata HOM05D007011 ORTHO05D008837 4.9e-46 188.7 120 70.8
BcaC02g07943 Brassica carinata HOM05D007011 ORTHO05D008837 6.4e-46 188.3 141 66.7
BcaB01g01479 Brassica carinata HOM05D007011 ORTHO05D008837 8.4e-46 188.0 196 45.4
BcaB05g24511 Brassica carinata HOM05D007011 ORTHO05D008837 7.1e-45 184.9 193 46.6
BcaC06g35773 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-44 184.1 193 47.7
BcaB04g16982 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-44 183.7 230 42.6
BolC6t35921H Brassica oleracea HOM05D000096 ORTHO05D008837 4.6e-44 182.2 230 45.7
BcaC05g27620 Brassica carinata HOM05D007011 ORTHO05D008837 7.9e-44 181.4 193 47.7
C05p36090 Brassica napus HOM05D007011 ORTHO05D008837 7.9e-44 181.4 193 47.7
BcaC02g12297 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-43 180.6 193 47.7
BcaC06g36231 Brassica carinata HOM05D007011 ORTHO05D008837 2.3e-43 179.9 225 42.7
C04p55380 Brassica napus HOM05D007011 ORTHO05D008837 5.1e-43 178.7 193 47.2
C06p04860 Brassica napus HOM05D007011 ORTHO05D008837 6.7e-43 178.3 232 42.7
C07p11970 Brassica napus HOM05D007011 ORTHO05D008837 8.7e-43 177.9 193 47.2
C03p58260 Brassica napus HOM05D007011 ORTHO05D008837 1.5e-42 177.2 239 42.3
C07p11040 Brassica napus HOM05D007011 ORTHO05D008837 9.6e-42 174.5 190 47.9
BcaC05g26483 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-40 170.2 225 40.4
BcaB06g27203 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-40 169.9 231 41.6
BcaC05g28456 Brassica carinata HOM05D007011 ORTHO05D008837 2.1e-36 156.8 193 45.1
BcaC06g36163 Brassica carinata HOM05D007011 ORTHO05D008837 6.0e-36 155.2 197 44.2
C05p27360 Brassica napus HOM05D007011 ORTHO05D008837 7.9e-36 154.8 194 44.3
BolC5t33187H Brassica oleracea HOM05D007011 ORTHO05D008837 1.0e-35 154.5 105 72.4
BcaB07g33137 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-35 152.5 193 42.0
C01p48060 Brassica napus HOM05D007011 ORTHO05D008837 3.4e-31 139.4 194 41.2
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 1.0e-30 137.9 80 76.2
A07p05900 Brassica napus HOM05D007011 ORTHO05D008837 6.5e-30 135.2 128 54.7
BolC6t35445H Brassica oleracea HOM05D007011 ORTHO05D008837 1.1e-26 124.4 142 45.8
C06p14510 Brassica napus HOM05D007011 ORTHO05D008837 2.0e-23 113.6 87 56.3
BolC3t16993H Brassica oleracea HOM05D007011 ORTHO05D008837 2.0e-23 113.6 87 56.3
BcaB01g01040 Brassica carinata HOM05D007011 ORTHO05D008837 4.5e-23 112.5 124 48.4
BcaB05g23795 Brassica carinata HOM05D007011 ORTHO05D008837 5.9e-23 112.1 167 40.7
BcaC06g36019 Brassica carinata HOM05D007011 ORTHO05D008837 7.6e-23 111.7 139 44.6
BolC3t19822H Brassica oleracea HOM05D007011 ORTHO05D008837 1.0e-22 111.3 70 71.4
C04p05480 Brassica napus HOM05D007011 ORTHO05D008837 6.1e-20 102.1 117 45.3
BolC5t33266H Brassica oleracea HOM05D007011 ORTHO05D008837 2.3e-19 100.1 85 57.6
C05p45430 Brassica napus HOM05D007011 ORTHO05D008837 9.7e-18 94.7 128 41.4
BcaB01g01187 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-16 91.3 78 53.8
C04p47830 Brassica napus HOM05D007011 ORTHO05D008837 1.8e-16 90.5 142 38.0
BraA06t25341Z Brassica rapa HOM05D007011 ORTHO05D008837 1.2e-15 87.8 142 35.9
BraA01t02471Z Brassica rapa HOM05D007011 ORTHO05D008837 4.5e-15 85.9 142 35.9
BcaB04g17596 Brassica carinata HOM05D007011 ORTHO05D008837 5.9e-15 85.5 78 51.3
BcaB05g22953 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-14 84.0 78 51.3
BcaC02g09397 Brassica carinata HOM05D007011 ORTHO05D008837 5.0e-14 82.4 80 50.0
BcaC06g36116 Brassica carinata HOM05D007011 ORTHO05D008837 3.2e-13 79.7 78 46.2
BcaB01g01156 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-11 73.9 164 30.5
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 2.3e-11 73.6 86 41.9
Sp6g12450 Schrenkiella parvula HOM05D035215 ORTHO05D008837 2.3e-11 73.6 178 27.0
BolC2t08703H Brassica oleracea HOM05D007011 ORTHO05D008837 3.0e-11 73.2 84 45.2
BcaC06g35385 Brassica carinata HOM05D007011 ORTHO05D008837 6.7e-11 72.0 71 50.7
BcaC02g10747 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-10 70.9 76 46.1
BcaC05g27078 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-10 70.9 72 51.4
C05p29590 Brassica napus HOM05D007011 ORTHO05D008837 1.5e-10 70.9 72 51.4
BolC5t31690H Brassica oleracea HOM05D007011 ORTHO05D008837 1.5e-10 70.9 72 51.4
Carub.0033s0001 Capsella rubella HOM05D007011 ORTHO05D008837 1.5e-10 70.9 145 27.6
C04p25440 Brassica napus HOM05D007011 ORTHO05D008837 5.7e-10 68.9 72 45.8
C08p18010 Brassica napus HOM05D002589 ORTHO05D002742 7.4e-10 68.6 113 38.1
C01p39260 Brassica napus HOM05D032673 ORTHO05D008837 9.7e-10 68.2 94 38.3
Carub.0008s2399 Capsella rubella HOM05D007011 ORTHO05D008837 1.7e-09 67.4 145 24.8
BolC1t02273H Brassica oleracea HOM05D007011 ORTHO05D008837 2.2e-09 67.0 79 44.3
BcaC01g02223 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-08 64.7 58 56.9
BcaB01g01346 Brassica carinata HOM05D000305 ORTHO05D000065 3.1e-08 63.2 72 44.4
Carub.0003s2700 Capsella rubella HOM05D018391 ORTHO05D020270 7.0e-08 62.0 147 29.3
Sp3g24020 Schrenkiella parvula HOM05D035215 ORTHO05D008837 8.5e-06 55.1 133 27.1


User provided reference genes

Program Settings