Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 6.0e-41 170.2 77 100.0
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 1.8e-40 168.7 77 98.7
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 3.0e-40 167.9 77 98.7
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 1.1e-39 166.0 77 97.4
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 1.1e-39 166.0 77 97.4
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 1.1e-31 139.4 62 98.4
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 4.2e-26 120.9 77 71.4
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 4.2e-26 120.9 77 71.4
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 3.0e-24 114.8 77 68.8
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 3.0e-24 114.8 77 68.8
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 2.9e-19 98.2 62 69.4
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.6e-17 92.4 74 59.5
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 1.5e-15 85.9 71 56.3
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.3e-15 84.7 74 54.1
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 8.2e-14 80.1 79 50.6
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 2.4e-13 78.6 78 48.7
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 1.2e-12 76.3 78 51.3
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 1.0e-11 73.2 77 48.1
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 9.4e-10 66.6 64 48.4
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 9.4e-10 66.6 64 48.4
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 9.4e-10 66.6 79 45.6
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 1.2e-09 66.2 64 46.9
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 2.1e-09 65.5 77 40.3
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 2.1e-09 65.5 77 40.3
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 2.7e-09 65.1 77 40.3
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 7.9e-09 63.5 77 40.3
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 1.0e-08 63.2 74 36.5
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 1.0e-08 63.2 77 37.7
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 6.7e-08 60.5 74 35.1
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.1e-07 59.7 78 39.7
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 2.6e-07 58.5 77 37.7
CARHR286760 Cardamine hirsuta HOM05D009342 ORTHO05D009997 2.2e-06 55.5 74 33.8
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.8e-06 55.1 78 37.2
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 8.2e-06 53.5 76 38.2


User provided reference genes

Program Settings