Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 1.7e-37 158.7 74 100.0
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 1.7e-37 158.7 74 100.0
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 9.6e-36 152.9 74 95.9
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 9.6e-36 152.9 74 95.9
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 5.1e-29 130.6 59 98.3
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 2.9e-24 114.8 77 70.1
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 8.4e-24 113.2 77 68.8
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 1.1e-23 112.8 77 68.8
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 1.1e-23 112.8 77 68.8
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 2.4e-23 111.7 77 67.5
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 9.0e-18 93.2 62 67.7
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 4.2e-15 84.3 73 58.9
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.3e-13 79.3 79 53.2
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 2.3e-13 78.6 69 56.5
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 5.1e-13 77.4 77 49.4
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.9e-12 75.5 73 53.4
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 5.6e-12 73.9 77 51.9
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 3.1e-10 68.2 76 51.3
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 5.3e-10 67.4 65 52.3
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 6.9e-10 67.0 65 53.8
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 6.9e-10 67.0 65 53.8
Carub.0004s1017 Capsella rubella HOM05D009342 ORTHO05D009997 1.5e-09 65.9 75 44.0
Carub.0004s1016 Capsella rubella HOM05D009342 ORTHO05D009997 4.5e-09 64.3 79 48.1
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 9.3e-07 56.6 75 38.7
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 1.2e-06 56.2 75 40.0
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 1.2e-06 56.2 75 40.0
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 1.6e-06 55.8 75 40.0
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 2.1e-06 55.5 75 40.0
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 2.1e-06 55.5 75 38.7


User provided reference genes

Program Settings