Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t08077Z Brassica rapa HOM05D001445 ORTHO05D001261 8.3e-16 85.9 43 100.0
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-15 85.5 42 100.0
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-15 85.5 42 100.0
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-15 85.5 42 100.0
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 1.1e-15 85.5 42 100.0
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 3.2e-15 84.0 42 97.6
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 4.1e-15 83.6 42 97.6
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 4.1e-15 83.6 42 97.6
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 9.2e-15 82.4 42 95.2
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 1.6e-14 81.6 41 97.6
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 1.6e-14 81.6 41 97.6
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 1.6e-14 81.6 42 95.2
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 7.8e-14 79.3 42 92.9
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 3.0e-13 77.4 42 88.1
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 3.0e-13 77.4 42 88.1
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 3.0e-13 77.4 42 88.1
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 5.1e-13 76.6 41 90.2
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 6.6e-13 76.3 42 88.1
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 8.6e-13 75.9 42 85.7
A02p30600 Brassica napus HOM05D001445 ORTHO05D001261 1.9e-12 74.7 42 83.3
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 1.9e-12 74.7 41 87.8
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 3.3e-12 73.9 42 83.3
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 3.3e-12 73.9 42 88.1
BcaC01g02648 Brassica carinata HOM05D001445 ORTHO05D001261 8.1e-11 69.3 34 94.1
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.1e-10 68.9 42 81.0
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 2.3e-10 67.8 42 81.0
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 4.0e-10 67.0 42 76.2
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.2e-09 65.5 42 76.2
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.2e-09 65.5 42 76.2
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.2e-09 65.5 42 81.0
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 4.4e-09 63.5 42 73.8
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 5.8e-09 63.2 42 73.8
A09p22690 Brassica napus HOM05D001445 ORTHO05D001261 2.2e-08 61.2 42 73.8
BraA09t37874Z Brassica rapa HOM05D001445 ORTHO05D001261 2.2e-08 61.2 42 73.8
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.2e-08 61.2 42 69.0
BolC9t55775H Brassica oleracea HOM05D001445 ORTHO05D001261 3.7e-08 60.5 42 73.8
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 3.7e-08 60.5 42 71.4
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 6.4e-08 59.7 41 70.7
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 1.9e-07 58.2 42 69.0
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 3.2e-07 57.4 41 70.7
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 4.1e-07 57.0 42 69.0
BcaC04g21666 Brassica carinata HOM05D001445 ORTHO05D001261 9.2e-07 55.8 42 71.4
C09p29180 Brassica napus HOM05D001445 ORTHO05D001261 9.2e-07 55.8 42 71.4
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 3.5e-06 53.9 42 61.9
A02p30500 Brassica napus HOM05D001445 ORTHO05D001261 4.6e-06 53.5 42 61.9
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 4.6e-06 53.5 42 61.9
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 4.6e-06 53.5 42 61.9
BraA02t08068Z Brassica rapa HOM05D001445 ORTHO05D001261 4.6e-06 53.5 42 61.9
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 6.0e-06 53.1 41 61.0
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 6.0e-06 53.1 41 61.0


User provided reference genes

Program Settings