Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t08069Z Brassica rapa HOM05D016958 ORTHO05D015000 4.5e-141 504.6 255 100.0
BraA06t26453Z Brassica rapa HOM05D016958 ORTHO05D015000 2.3e-137 492.3 255 97.3
BraA09t38793Z Brassica rapa HOM05D016958 ORTHO05D015000 4.0e-134 481.5 250 97.2
C03p66550 Brassica napus HOM05D016958 ORTHO05D015000 1.3e-116 423.3 255 86.3
BolC8t48810H Brassica oleracea HOM05D016958 ORTHO05D015000 2.2e-103 379.4 250 79.2
A08p07290 Brassica napus HOM05D016958 ORTHO05D015000 1.3e-60 237.3 116 96.6
A02p38550 Brassica napus HOM05D016958 ORTHO05D015000 8.6e-60 234.6 116 94.8
BcaC05g25888 Brassica carinata HOM05D011476 ORTHO05D019921 4.2e-38 162.5 102 84.3
A09p32510 Brassica napus HOM05D011476 ORTHO05D019921 1.0e-28 131.3 107 72.0
A01p28760 Brassica napus HOM05D011476 ORTHO05D015000 3.0e-28 129.8 107 71.0
A03p46410 Brassica napus HOM05D011476 ORTHO05D015000 3.0e-28 129.8 107 71.0
A07p24760 Brassica napus HOM05D011476 ORTHO05D015000 3.0e-28 129.8 107 71.0
C08p10460 Brassica napus HOM05D011476 ORTHO05D019921 3.0e-28 129.8 107 71.0
C09p43090 Brassica napus HOM05D011476 ORTHO05D015000 3.0e-28 129.8 107 71.0
BcaB05g23542 Brassica carinata HOM05D011476 ORTHO05D015000 1.9e-27 127.1 165 49.7
BolC2t11739H Brassica oleracea HOM05D016958 ORTHO05D015000 1.9e-27 127.1 60 90.0
C05p18450 Brassica napus HOM05D011476 ORTHO05D019921 1.7e-23 114.0 107 62.6
BcaC09g51136 Brassica carinata HOM05D011476 ORTHO05D019921 6.2e-18 95.5 52 92.3
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-07 60.5 161 30.4
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 60.1 154 34.4
A07p23010 Brassica napus HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BraA01t01169Z Brassica rapa HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BraA01t03378Z Brassica rapa HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BraA06t24922Z Brassica rapa HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BraA07t28935Z Brassica rapa HOM05D010374 ORTHO05D107821 2.9e-07 60.1 70 45.7
BraA09t39696Z Brassica rapa HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BraA09t39716Z Brassica rapa HOM05D010374 ORTHO05D016822 2.9e-07 60.1 70 45.7
BcaB07g33399 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 59.7 147 36.7
BolC5t32264H Brassica oleracea HOM05D010374 ORTHO05D016822 6.5e-07 58.9 70 44.3
C02p19450 Brassica napus HOM05D023766 ORTHO05D024224 1.1e-06 58.2 106 39.6
BcaB01g02811 Brassica carinata HOM05D010392 ORTHO05D000411 1.9e-06 57.4 145 34.5
C05p23520 Brassica napus HOM05D010374 ORTHO05D016822 2.5e-06 57.0 70 42.9
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-06 56.6 166 29.5
BcaC07g37225 Brassica carinata HOM05D010374 ORTHO05D016822 3.2e-06 56.6 68 44.1
C02p16540 Brassica napus HOM05D010374 ORTHO05D016822 5.5e-06 55.8 70 41.4


User provided reference genes

Program Settings