Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.3e-62 241.9 111 100.0
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.3e-62 241.9 111 100.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 4.7e-47 191.0 109 81.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.2e-45 186.4 107 81.3
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 3.4e-45 184.9 111 75.7
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 9.9e-45 183.3 109 75.2
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 3.8e-44 181.4 111 72.1
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 4.9e-44 181.0 111 77.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 4.9e-44 181.0 111 77.5
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.9e-43 179.1 109 73.4
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 9.3e-43 176.8 111 70.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.7e-41 172.6 108 74.1
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 3.9e-41 171.4 108 74.1
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 3.9e-41 171.4 108 74.1
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.5e-40 169.5 109 74.3
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.6e-39 166.0 109 71.6
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-38 163.3 108 70.4
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.0e-37 159.1 108 67.6
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.5e-37 157.9 108 69.4
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 9.9e-37 156.8 107 69.2
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.9e-33 144.8 106 58.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.9e-32 142.5 106 60.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.3e-32 141.4 106 60.4
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 4.3e-32 141.4 106 57.5
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.3e-32 141.4 106 57.5
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.3e-32 141.4 106 57.5
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 4.3e-32 141.4 106 57.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 5.6e-32 141.0 99 62.6
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 7.4e-32 140.6 106 60.4
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 7.4e-32 140.6 108 58.3
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 9.6e-32 140.2 106 58.5
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.6e-31 139.4 98 62.2
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 2.1e-31 139.0 106 57.5
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 4.8e-31 137.9 106 56.6
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.1e-30 136.7 106 57.5
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.4e-30 136.3 103 58.3
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.4e-30 136.3 103 58.3
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.4e-30 136.3 103 58.3
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 2.4e-30 135.6 106 57.5
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.1e-30 135.2 105 56.2
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.1e-30 135.2 105 56.2
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.0e-30 134.8 106 55.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 4.0e-30 134.8 105 55.2
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 5.3e-30 134.4 106 55.7
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.5e-29 132.9 106 54.7
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.6e-29 132.1 104 57.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.6e-29 132.1 95 61.1
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.5e-29 131.3 109 52.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 9.9e-29 130.2 105 53.3
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 9.9e-29 130.2 99 57.6
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 9.9e-29 130.2 106 54.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.3e-28 129.8 109 51.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.3e-28 129.8 95 60.0
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.2e-28 129.0 111 50.5
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.4e-28 127.5 105 51.4
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.1e-27 126.7 106 51.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.9e-27 125.9 105 53.3
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.9e-27 125.9 105 51.4
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 6.0e-26 120.9 108 49.1
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.3e-25 119.8 107 47.7
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.3e-25 119.0 106 49.1
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.0e-25 118.6 105 48.6
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.9e-25 118.2 97 54.6
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 6.7e-25 117.5 106 48.1
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.5e-24 116.3 104 51.9
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.9e-24 115.9 95 52.6
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.5e-24 115.5 96 57.3
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.6e-23 112.8 101 52.5
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 8.2e-23 110.5 71 66.2
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.4e-22 109.8 87 56.3
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.8e-22 109.4 101 52.5
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 5.3e-22 107.8 104 45.2
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 6.9e-22 107.5 67 67.2
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.2e-21 106.7 105 42.9
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.5e-21 106.3 101 45.5
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.5e-21 106.3 101 50.5
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.0e-21 105.9 93 46.2
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 2.6e-21 105.5 97 48.5
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 7.6e-21 104.0 103 49.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 7.6e-21 104.0 103 49.5
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.0e-20 103.6 108 46.3
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 1.0e-20 103.6 92 52.2
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 1.3e-20 103.2 102 44.1
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 6.5e-20 100.9 107 44.9
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.1e-19 100.1 101 46.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.9e-19 99.4 103 44.7
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 3.2e-19 98.6 93 48.4
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.3e-19 97.1 89 53.9
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.6e-18 96.3 101 46.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 3.5e-18 95.1 102 45.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 1.3e-17 93.2 107 37.4
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.3e-17 93.2 95 46.3
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.8e-17 92.8 93 45.2
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.8e-17 92.8 112 41.1
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.3e-17 92.4 93 44.1
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.0e-17 92.0 116 40.5
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 5.1e-17 91.3 89 50.6
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 5.1e-17 91.3 86 45.3
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 6.7e-17 90.9 93 47.3
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 8.7e-17 90.5 66 59.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 8.7e-17 90.5 74 59.5
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.1e-16 90.1 67 56.7
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 5.7e-16 87.8 57 70.2
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.7e-16 87.0 108 46.3
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 8.2e-15 84.0 116 37.1
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 5.3e-14 81.3 91 44.0
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 9.0e-14 80.5 53 66.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 4.3e-08 61.6 85 35.3


User provided reference genes

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