Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t06574Z Brassica rapa HOM05D014165 ORTHO05D016792 6.4e-63 243.8 116 100.0
BraA08t33841Z Brassica rapa HOM05D014165 ORTHO05D016792 1.2e-61 239.6 116 98.3
BraA02t08685Z Brassica rapa HOM05D014165 ORTHO05D016792 1.0e-60 236.5 116 97.4
BolC1t05622H Brassica oleracea HOM05D014165 ORTHO05D016792 1.1e-54 216.5 116 88.8
BraA09t39025Z Brassica rapa HOM05D014165 ORTHO05D016792 5.0e-47 191.0 115 82.6
A09p41400 Brassica napus HOM05D014165 ORTHO05D016792 7.4e-43 177.2 88 97.7
BcaC04g19021 Brassica carinata HOM05D014165 ORTHO05D016792 4.7e-29 131.3 77 84.4
BcaC06g36267 Brassica carinata HOM05D014165 ORTHO05D016792 6.3e-26 120.9 74 78.4
BraA06t26182Z Brassica rapa HOM05D014165 ORTHO05D016792 1.0e-15 87.0 51 84.3
BraA07t29076Z Brassica rapa HOM05D014165 ORTHO05D016792 3.8e-15 85.1 51 82.4
BcaC09g50939 Brassica carinata HOM05D009405 ORTHO05D011711 9.4e-14 80.5 102 45.1
C04p37730 Brassica napus HOM05D000305 ORTHO05D000065 4.0e-12 75.1 111 31.5
C07p51450 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-11 72.8 107 31.8
A04p07620 Brassica napus HOM05D010193 ORTHO05D012632 3.4e-11 72.0 115 29.6
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-11 70.5 115 30.4
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-10 68.9 115 29.6
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-10 68.9 115 31.3
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-10 67.8 114 29.8
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-10 67.8 114 31.6
C06p14120 Brassica napus HOM05D000096 ORTHO05D000045 6.3e-10 67.8 58 63.8
BolC6t36590H Brassica oleracea HOM05D000096 ORTHO05D000045 6.3e-10 67.8 58 63.8
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-10 67.8 114 29.8
A09p36280 Brassica napus HOM05D010193 ORTHO05D012632 8.3e-10 67.4 115 28.7
THA.LOC104822029 Tarenaya hassleriana HOM05D000305 ORTHO05D000065 5.4e-09 64.7 114 29.8
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 7.0e-09 64.3 115 33.0
BcaC09g50143 Brassica carinata HOM05D010193 ORTHO05D012632 7.0e-09 64.3 116 33.6
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-08 62.4 102 31.4
BraA05t20758Z Brassica rapa HOM05D000305 ORTHO05D000065 4.5e-08 61.6 110 28.2
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-07 60.5 114 26.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-07 60.5 114 26.3
A04p12470 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-07 60.1 43 67.4
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.3e-07 60.1 114 28.9
C04p38740 Brassica napus HOM05D014165 ORTHO05D099098 1.7e-07 59.7 42 64.3
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-07 58.5 115 27.0
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-07 58.5 102 31.4
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-07 58.5 115 27.0
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 3.8e-07 58.5 114 27.2
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 3.8e-07 58.5 114 27.2
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-07 58.2 115 25.2
BolC7t41126H Brassica oleracea HOM05D009405 ORTHO05D011711 5.0e-07 58.2 53 52.8
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-07 57.8 115 27.8
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-07 57.4 114 26.3
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 8.6e-07 57.4 115 27.8
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 57.0 114 28.1
C07p05170 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-06 57.0 114 28.9
Thhalv10002797m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.1e-06 57.0 114 27.2
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-06 56.6 102 30.4
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-06 56.6 114 26.3
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-06 56.6 102 30.4
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-06 56.2 114 26.3
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-06 56.2 114 26.3
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-06 56.2 92 31.5
BcaC03g15528 Brassica carinata HOM05D010193 ORTHO05D012632 2.5e-06 55.8 109 27.5
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-06 55.8 114 28.9
C04p14760 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-06 55.5 114 28.1
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-06 55.5 114 26.3
Sp4g05770 Schrenkiella parvula HOM05D000313 ORTHO05D000065 3.3e-06 55.5 112 26.8
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 4.2e-06 55.1 114 25.4
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-06 55.1 115 27.8
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-06 55.1 114 25.4
BcaC02g09829 Brassica carinata HOM05D010193 ORTHO05D012632 5.5e-06 54.7 115 27.0
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-06 54.7 98 29.6
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 5.5e-06 54.7 114 28.1
Carub.0004s2878 Capsella rubella HOM05D000305 ORTHO05D000065 5.5e-06 54.7 112 26.8
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 5.5e-06 54.7 114 25.4
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 54.3 110 26.4
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-06 54.3 95 31.6
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-06 54.3 112 25.9
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-06 53.9 99 26.3
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-06 53.9 96 29.2
A05p35590 Brassica napus HOM05D009405 ORTHO05D011711 9.5e-06 53.9 25 84.0
A06p21610 Brassica napus HOM05D009405 ORTHO05D041353 9.5e-06 53.9 25 84.0
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 53.9 114 25.4
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 53.9 114 25.4
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-06 53.9 115 26.1
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-06 53.9 114 27.2
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 9.5e-06 53.9 114 25.4


User provided reference genes

Program Settings