Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 3.6e-51 204.5 97 100.0
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-48 195.7 97 96.9
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-48 195.7 97 96.9
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 8.4e-48 193.4 97 95.9
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 3.2e-47 191.4 98 95.9
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 4.2e-39 164.5 97 85.6
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 3.9e-37 157.9 97 81.4
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 8.1e-35 150.2 78 93.6
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 6.9e-34 147.1 82 89.0
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-33 145.6 69 100.0
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 7.6e-33 143.7 69 98.6
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 1.9e-31 139.0 70 97.1
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-31 137.9 66 97.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 6.0e-30 134.0 66 97.0
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 2.5e-28 128.6 66 93.9
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 7.4e-28 127.1 66 92.4
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 9.6e-28 126.7 64 95.3
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.3e-27 126.3 97 70.1
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-27 125.9 65 92.3
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.6e-27 125.9 66 92.4
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 2.8e-27 125.2 69 88.4
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 3.7e-27 124.8 66 90.9
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 3.7e-27 124.8 66 90.9
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 4.8e-27 124.4 66 92.4
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 6.2e-27 124.0 67 92.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 6.2e-27 124.0 66 90.9
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 6.2e-27 124.0 67 92.5
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 6.2e-27 124.0 67 92.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 87.9
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-26 123.2 66 90.9
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 1.8e-26 122.5 67 91.0
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.8e-26 122.5 66 90.9
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.8e-26 122.5 66 89.4
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-26 122.1 66 89.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.3e-26 120.9 66 89.4
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.3e-26 120.9 66 89.4
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 5.3e-26 120.9 66 89.4
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.0e-25 119.0 91 68.1
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.0e-25 119.0 66 86.4
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 2.0e-25 119.0 65 90.8
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 2.6e-25 118.6 66 87.9
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.8e-24 114.8 70 84.3
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.9e-24 114.4 66 81.8
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.4e-23 112.8 67 82.1
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.1e-22 109.0 66 81.8
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.7e-22 108.6 57 93.0
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 4.6e-22 107.8 56 92.9
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 6.0e-22 107.5 66 81.8
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 7.9e-22 107.1 57 89.5
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.0e-21 105.1 57 87.7
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 3.9e-21 104.8 50 100.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 3.9e-21 104.8 65 78.5
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.5e-20 102.1 58 91.4
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.1e-19 99.0 50 96.0
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 4.8e-19 97.8 46 100.0
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 1.1e-18 96.7 61 78.7
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-18 95.9 50 92.0
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 1.8e-18 95.9 50 92.0
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-18 95.9 50 92.0
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 2.4e-18 95.5 48 95.8
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.1e-18 95.1 50 94.0
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-17 93.2 44 100.0
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 4.5e-17 91.3 51 88.2
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 4.9e-16 87.8 47 91.5
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 8.4e-16 87.0 83 59.0
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-15 85.5 42 95.2
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.2e-15 85.1 69 68.1
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 9.3e-15 83.6 60 71.7
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 4.6e-14 81.3 43 93.0
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 1.3e-13 79.7 79 62.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.7e-13 77.0 40 90.0
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 3.3e-12 75.1 40 87.5
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 3.3e-12 75.1 40 87.5
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.3e-12 74.7 40 87.5
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-11 73.2 40 85.0
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.6e-11 72.8 40 82.5
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.6e-11 72.8 40 82.5
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.6e-11 72.8 40 82.5
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.6e-11 72.8 40 82.5
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.6e-11 72.8 40 82.5
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.8e-11 72.0 34 97.1
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.4e-10 69.7 40 82.5
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.8e-10 69.3 34 94.1
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 2.6e-09 65.5 33 90.9
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 7.6e-09 63.9 33 90.9
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 1.3e-08 63.2 40 77.5
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 8.5e-08 60.5 31 90.3
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.2e-07 58.2 35 82.9
Nn6g32822 Nelumbo nucifera HOM05D000963 ORTHO05D004715 3.6e-06 55.1 47 61.7
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 6.1e-06 54.3 31 80.6


User provided reference genes

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