Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC46t60992H Brassica oleracea HOM05D000388 ORTHO05D009867 3.8e-34 147.5 70 100.0
BolSC46t61043H Brassica oleracea HOM05D000388 ORTHO05D009867 3.8e-34 147.5 70 100.0
BolSC47t61118H Brassica oleracea HOM05D000388 ORTHO05D009867 3.8e-34 147.5 70 100.0
BolC9t55816H Brassica oleracea HOM05D000388 ORTHO05D009867 6.5e-26 120.2 69 84.1
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 7.4e-22 106.7 55 94.5
arahy.Tifrunner.gnm1.ann1.GGP979 Arachis hypogaea HOM05D031364 ORTHO05D009867 2.8e-21 104.8 116 50.9
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 2.7e-16 88.2 61 72.1
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 3.6e-16 87.8 44 90.9
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 3.6e-16 87.8 44 90.9
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 4.7e-16 87.4 47 85.1
Carub.0025s0002 Capsella rubella HOM05D000388 ORTHO05D009867 4.7e-16 87.4 41 100.0
Hund28251 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.1e-16 87.0 69 63.8
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 1.0e-15 86.3 43 93.0
Solyc00g500059.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 1.4e-15 85.9 41 97.6
Solyc00g500144.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 1.4e-15 85.9 41 97.6
Solyc00g500211.1 Solanum lycopersicum HOM05D000388 ORTHO05D009867 1.4e-15 85.9 41 97.6
EL10As1g23048 Beta vulgaris HOM05D000388 ORTHO05D009867 2.3e-15 85.1 46 84.8
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 3.0e-15 84.7 61 67.2
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 3.0e-15 84.7 61 67.2
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 3.0e-15 84.7 61 67.2
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 3.0e-15 84.7 61 67.2
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 3.9e-15 84.3 47 83.0
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 47 83.0
Medtr0477s0040 Medicago truncatula HOM05D000388 ORTHO05D009867 3.9e-15 84.3 43 90.7
Medtr4g051213 Medicago truncatula HOM05D000388 ORTHO05D009867 3.9e-15 84.3 43 90.7
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 3.9e-15 84.3 61 67.2
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 5.2e-15 84.0 61 65.6
Lsat_1_v5_gn_2_122100 Lactuca sativa HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Lsat_1_v5_gn_5_159900 Lactuca sativa HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund08562 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund18037 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund19305 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund19310 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund24074 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27447 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27567 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27603 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27661 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27704 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27749 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27758 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27800 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27845 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund27911 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28003 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28024 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28031 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28053 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28090 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28097 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28118 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28134 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28159 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28167 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28194 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28203 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28243 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28285 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28297 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28341 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28346 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28358 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28367 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28392 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28408 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28445 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28583 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28623 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28692 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund28726 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29032 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29058 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29133 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29412 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29623 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29676 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29907 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund29949 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund30488 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Hund30628 Selenicereus undatus HOM05D000388 ORTHO05D009867 6.7e-15 83.6 41 92.7
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.8e-15 83.2 61 65.6
Nitab4.5_0006114g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009867 1.5e-14 82.4 41 92.7
Migut.D01352 Erythranthe guttata HOM05D000388 ORTHO05D009867 2.0e-14 82.0 41 90.2
Gohir.A09G045400 Gossypium hirsutum HOM05D000388 ORTHO05D009867 2.0e-14 82.0 41 90.2
Gohir.A12G033000 Gossypium hirsutum HOM05D000388 ORTHO05D009867 2.0e-14 82.0 41 90.2
Gohir.D04G096448 Gossypium hirsutum HOM05D000388 ORTHO05D009867 2.0e-14 82.0 41 90.2
Gohir.D13G064033 Gossypium hirsutum HOM05D000388 ORTHO05D009867 2.0e-14 82.0 41 90.2
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.0e-14 82.0 43 90.7
LjContig00318g0002844 Lotus japonicus HOM05D000388 ORTHO05D009867 2.6e-14 81.6 41 87.8
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 3.3e-14 81.3 61 65.6
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 3.3e-14 81.3 61 65.6
Gohir.A07G163627 Gossypium hirsutum HOM05D000388 ORTHO05D009867 9.7e-14 79.7 41 87.8
Gohir.D02G115550 Gossypium hirsutum HOM05D000388 ORTHO05D009867 9.7e-14 79.7 42 83.3
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 9.7e-14 79.7 61 63.9
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.3e-13 79.3 58 70.7
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 1.7e-13 79.0 44 81.8
Solyc09g015340.3 Solanum lycopersicum HOM05D000388 ORTHO05D009867 2.2e-13 78.6 41 90.2
Gohir.A12G044400 Gossypium hirsutum HOM05D000388 ORTHO05D009867 2.8e-13 78.2 41 87.8
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 4.8e-13 77.4 41 87.8
ClCG07G007490 Citrullus lanatus HOM05D000388 ORTHO05D009867 1.1e-12 76.3 42 88.1
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 1.1e-12 76.3 44 79.5
Gohir.D04G096708 Gossypium hirsutum HOM05D000388 ORTHO05D009867 4.1e-12 74.3 40 85.0
Medtr8g102790 Medicago truncatula HOM05D000388 ORTHO05D009867 5.3e-12 73.9 39 84.6
Lalb_Chr06g0169301 Lupinus albus HOM05D000388 ORTHO05D009867 9.1e-12 73.2 39 84.6
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.2e-11 72.8 41 80.5
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 1.6e-11 72.4 41 78.0
arahy.Tifrunner.gnm1.ann1.MY7VXV Arachis hypogaea HOM05D000388 ORTHO05D009867 3.5e-11 71.2 63 60.3
Lsat_1_v5_gn_7_15061 Lactuca sativa HOM05D000388 ORTHO05D009867 3.5e-11 71.2 40 82.5
arahy.Tifrunner.gnm1.ann1.VJB3FT Arachis hypogaea HOM05D000388 ORTHO05D009867 4.5e-11 70.9 35 91.4
Phvul.004G150700 Phaseolus vulgaris HOM05D000388 ORTHO05D009867 2.2e-10 68.6 43 74.4
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 3.2e-09 64.7 47 68.1
Medtr1g041800 Medicago truncatula HOM05D000388 ORTHO05D009867 6.1e-08 60.5 53 60.4
MD00G1082800 Malus domestica HOM05D000388 ORTHO05D009867 8.0e-08 60.1 41 73.2
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.4e-07 59.3 60 51.7
vmacro22414 Vaccinium macrocarpon HOM05D001033 ORTHO05D004888 2.6e-06 55.1 30 83.3


User provided reference genes

Program Settings