Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 5.9e-52 207.2 103 100.0
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 5.9e-52 207.2 103 100.0
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 5.9e-52 207.2 103 100.0
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 5.9e-52 207.2 103 100.0
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 5.0e-51 204.1 103 99.0
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 5.0e-51 204.1 103 99.0
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 5.0e-51 204.1 103 99.0
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-45 186.4 96 96.9
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-45 186.4 96 96.9
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.9e-45 185.7 98 93.9
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 2.4e-45 185.3 96 95.8
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 7.0e-45 183.7 100 93.0
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 1.2e-44 183.0 96 94.8
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 6.0e-44 180.6 97 92.8
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 6.0e-44 180.6 95 95.8
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.5e-42 176.0 95 93.7
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 1.8e-40 169.1 98 87.8
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 4.4e-39 164.5 96 87.5
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 5.8e-39 164.1 98 85.7
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 2.2e-38 162.2 81 97.5
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 9.2e-37 156.8 98 82.7
BcaB02g11354 Brassica carinata HOM05D000963 ORTHO05D011117 1.6e-33 146.0 73 98.6
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.2e-31 139.8 75 90.7
MELO3C028157.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.6e-31 138.7 71 95.8
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 2.9e-30 135.2 78 88.5
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.3e-27 126.3 62 98.4
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 5.6e-26 120.9 62 95.2
MELO3C028252.2 Cucumis melo HOM05D000963 ORTHO05D011117 5.6e-26 120.9 62 96.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.6e-26 120.9 62 95.2
BraSC143t45648Z Brassica rapa HOM05D000963 ORTHO05D011117 7.8e-20 100.5 49 95.9
BcaC04g22599 Brassica carinata HOM05D000963 ORTHO05D011117 1.3e-19 99.8 56 83.9
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 3.0e-19 98.6 55 87.3
BraSC58t46452Z Brassica rapa HOM05D000963 ORTHO05D011117 8.7e-19 97.1 50 94.0
VMungo1024G0004 Vigna mungo HOM05D000963 ORTHO05D011117 1.1e-18 96.7 70 68.6
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 7.3e-18 94.0 56 87.5
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.3e-17 93.2 50 90.0
arahy.Tifrunner.gnm1.ann1.H1VL0A Arachis hypogaea HOM05D000963 ORTHO05D011117 3.6e-17 91.7 68 69.1
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 2.0e-15 85.9 43 95.3
EL10Ac6g15367 Beta vulgaris HOM05D000963 ORTHO05D011117 4.4e-15 84.7 83 61.4
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 3.8e-14 81.6 47 85.1
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 8.4e-14 80.5 43 90.7
MELO3C030559.2 Cucumis melo HOM05D000963 ORTHO05D011117 1.1e-13 80.1 41 87.8
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 2.1e-12 75.9 41 92.7
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 1.0e-11 73.6 43 81.4
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 2.3e-11 72.4 38 94.7
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 3.3e-10 68.6 42 81.0
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.3e-09 66.6 36 94.4
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 1.3e-09 66.6 36 94.4
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.4e-08 63.2 44 65.9
SHI36891 Sapria himalayana HOM05D000963 ORTHO05D011117 6.9e-08 60.8 32 93.8
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 2.6e-07 58.9 33 87.9
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 4.5e-07 58.2 31 87.1
Cfa023002 Carpinus fangiana HOM05D000963 ORTHO05D011117 7.6e-07 57.4 29 89.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 6.4e-06 54.3 29 93.1


User provided reference genes

Program Settings