Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-50 203.0 97 100.0
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 4.0e-50 201.1 97 99.0
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 9.9e-49 196.4 98 98.0
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-48 196.1 97 96.9
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-47 193.0 97 95.9
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 6.0e-38 160.6 97 84.5
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 6.6e-37 157.1 78 97.4
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 5.6e-36 154.1 97 80.4
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.7e-32 142.5 82 86.6
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 2.4e-31 138.7 66 100.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 9.3e-31 136.7 66 98.5
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-30 136.0 65 98.5
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-30 136.0 66 98.5
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-30 136.0 66 98.5
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-30 136.0 66 98.5
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-30 136.0 66 98.5
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 2.7e-30 135.2 64 100.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 3.5e-30 134.8 66 97.0
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 4.6e-30 134.4 66 98.5
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 4.6e-30 134.4 69 94.2
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 6.0e-30 134.0 66 97.0
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.9e-30 133.7 66 97.0
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.9e-30 133.7 66 97.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.0e-29 133.3 66 93.9
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.3e-29 132.9 66 97.0
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.3e-29 132.9 66 97.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.3e-29 132.9 66 97.0
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 1.8e-29 132.5 69 92.8
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.8e-29 132.5 66 97.0
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-29 132.1 66 95.5
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 2.3e-29 132.1 69 92.8
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 3.0e-29 131.7 66 95.5
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 3.0e-29 131.7 66 95.5
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 5.1e-29 131.0 67 97.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 5.1e-29 131.0 66 95.5
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 5.1e-29 131.0 67 97.0
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 5.1e-29 131.0 67 97.0
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 8.7e-29 130.2 66 95.5
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 1.5e-28 129.4 67 95.5
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.5e-28 129.4 66 93.9
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.9e-28 129.0 66 92.4
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 3.3e-28 128.3 66 92.4
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 4.3e-28 127.9 70 91.4
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.3e-28 127.9 66 93.9
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.3e-28 127.9 66 93.9
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 4.3e-28 127.9 66 93.9
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.6e-27 125.9 97 70.1
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 2.1e-27 125.6 66 92.4
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.0e-26 121.3 66 86.4
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.9e-26 120.6 70 87.1
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.6e-25 118.6 91 68.1
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.4e-25 118.2 67 85.1
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.7e-24 115.9 66 86.4
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.2e-24 115.5 66 89.4
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 2.2e-24 115.5 57 98.2
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 3.8e-24 114.8 56 98.2
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 4.9e-24 114.4 66 86.4
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.5e-23 110.9 57 93.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 5.5e-23 110.9 65 83.1
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.1e-22 109.0 57 91.2
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 1.0e-21 106.7 61 85.2
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.3e-21 106.3 67 86.6
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.3e-21 105.5 73 75.3
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.5e-20 102.8 50 98.0
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 1.5e-20 102.8 50 98.0
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.5e-20 102.8 50 98.0
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.1e-19 99.0 50 96.0
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 4.8e-19 97.8 46 100.0
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 2.4e-18 95.5 48 95.8
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.1e-18 95.1 50 94.0
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-17 93.2 44 100.0
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.5e-17 92.8 53 86.8
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.8e-17 90.9 69 71.0
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 4.9e-16 87.8 47 91.5
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.4e-16 87.0 66 71.2
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.4e-16 87.0 40 100.0
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 2.5e-15 85.5 83 59.0
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 3.2e-15 85.1 79 64.6
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.2e-15 84.7 40 97.5
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.2e-14 83.2 45 88.9
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.7e-14 82.0 40 95.0
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 3.5e-14 81.6 40 92.5
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.5e-14 81.6 40 92.5
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 4.6e-14 81.3 43 93.0
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.0e-14 80.9 40 95.0
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-13 79.7 40 90.0
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-13 79.7 40 90.0
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-13 79.7 40 90.0
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-13 79.7 40 90.0
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-13 79.7 40 90.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.1e-12 76.6 40 90.0
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 1.8e-10 69.3 40 85.0
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.8e-10 69.3 34 94.1
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.1e-10 68.2 35 94.3
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 6.9e-10 67.4 40 82.5
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.5e-09 64.7 32 93.8
Nn6g32822 Nelumbo nucifera HOM05D000963 ORTHO05D004715 3.8e-08 61.6 47 68.1
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 1.1e-07 60.1 31 90.3
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 6.1e-06 54.3 31 80.6


User provided reference genes

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