Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 1.4e-30 135.6 65 100.0
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.8e-30 135.2 64 100.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.8e-30 135.2 64 100.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.3e-30 133.7 64 98.4
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 2.6e-29 131.3 64 96.9
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.8e-29 130.2 64 95.3
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 5.8e-29 130.2 64 95.3
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 5.8e-29 130.2 64 95.3
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 9.9e-29 129.4 64 95.3
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-28 129.0 65 93.8
Hma1.2p1_0544F.1_g175783 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 4.9e-28 127.1 64 93.8
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 1.9e-27 125.2 61 95.1
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.2e-27 124.4 66 92.4
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 4.2e-27 124.0 64 90.6
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-27 123.6 64 92.2
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-27 123.6 64 92.2
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-27 123.6 64 92.2
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-27 123.6 64 92.2
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-27 123.6 64 92.2
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 7.1e-27 123.2 65 90.8
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.6e-26 122.1 65 92.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 2.1e-26 121.7 64 90.6
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.7e-26 121.3 64 87.5
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 4.6e-26 120.6 64 90.6
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 6.0e-26 120.2 66 87.9
Phvul.003G067400 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 1.3e-25 119.0 62 90.3
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.3e-25 119.0 63 87.3
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.8e-25 118.6 62 90.3
Aqoxy2G01968 Aquilegia oxysepala HOM05D001966 ORTHO05D007227 3.9e-25 117.5 61 88.5
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 3.9e-25 117.5 62 88.7
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.1e-24 115.9 65 87.7
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 1.5e-24 115.5 64 85.9
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 3.3e-24 114.4 64 85.9
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 7.4e-24 113.2 62 87.1
FvH4_c3g00070 Fragaria vesca HOM05D001966 ORTHO05D007227 9.6e-24 112.8 67 88.1
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 9.6e-24 112.8 64 85.9
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 9.6e-24 112.8 64 85.9
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 2.1e-23 111.7 55 92.7
HanXRQChr05g0134861 Helianthus annuus HOM05D001966 ORTHO05D007227 2.1e-23 111.7 58 89.7
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 3.7e-23 110.9 53 98.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 3.7e-23 110.9 53 98.1
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-22 109.0 63 81.0
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 2.4e-22 108.2 66 81.8
BolSC29t60498H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-22 108.2 50 100.0
BolSC35t60683H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-22 108.2 50 100.0
BolSC44t60831H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-22 108.2 50 100.0
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.4e-22 108.2 67 85.1
Glyma.08G276350 Glycine max HOM05D001966 ORTHO05D007227 9.0e-22 106.3 62 77.4
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 9.0e-22 106.3 52 92.3
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-21 104.8 63 82.5
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.6e-21 104.8 53 90.6
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 2.6e-21 104.8 58 86.2
Glyma.05G084525 Glycine max HOM05D001966 ORTHO05D007227 4.2e-19 97.4 62 75.8
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 7.1e-19 96.7 50 90.0
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 2.1e-18 95.1 52 84.6
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.7e-18 94.7 46 97.8
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.7e-18 94.7 46 97.8
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.7e-18 94.7 46 97.8
Glyma.09G133875 Glycine max HOM05D001966 ORTHO05D007227 1.3e-17 92.4 61 75.4
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.1e-17 90.5 63 69.8
SHI36394 Sapria himalayana HOM05D001966 ORTHO05D007227 1.1e-16 89.4 47 87.2
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 1.1e-16 89.4 63 71.4
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.6e-15 85.5 51 80.4
FAN13G0121 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.8e-15 84.7 67 71.6
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.8e-14 82.0 58 69.0
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 5.3e-14 80.5 58 69.0
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 4.5e-13 77.4 47 78.7
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 5.0e-12 73.9 49 69.4
arahy.Tifrunner.gnm1.ann1.N1DH3R Arachis hypogaea HOM05D001966 ORTHO05D007227 2.5e-11 71.6 58 63.8
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 5.5e-11 70.5 50 70.0
Hma1.2p1_0544F.1_g175786 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 9.3e-11 69.7 34 94.1
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.1e-10 67.0 45 75.6
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.3e-09 65.9 41 75.6
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 6.7e-09 63.5 46 67.4
MELO3C027875.2 Cucumis melo HOM05D001966 ORTHO05D007227 5.7e-08 60.5 33 81.8
MELO3C000925.2 Cucumis melo HOM05D001966 ORTHO05D007227 8.2e-07 56.6 33 78.8
Sed0026700 Sechium edule HOM05D001966 ORTHO05D007227 4.1e-06 54.3 41 63.4


User provided reference genes

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