Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-27 124.8 68 100.0
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 2.6e-24 114.8 66 93.9
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 3.8e-23 110.9 66 90.9
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 5.0e-23 110.5 70 91.4
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 1.9e-22 108.6 66 92.4
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 2.5e-22 108.2 66 87.9
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 9.4e-22 106.3 66 87.9
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 4.7e-21 104.0 66 84.8
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.8e-20 102.1 67 82.1
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.8e-20 102.1 67 82.1
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.0e-19 98.6 64 87.5
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 2.6e-19 98.2 68 80.9
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 3.4e-19 97.8 62 85.5
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 4.4e-19 97.4 68 79.4
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.5e-19 96.7 67 79.1
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 7.5e-19 96.7 70 77.1
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 1.3e-18 95.9 62 83.9
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 1.7e-18 95.5 70 80.0
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 2.2e-18 95.1 68 76.5
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.2e-18 95.1 67 79.1
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.8e-18 94.7 57 86.0
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 2.8e-18 94.7 69 79.7
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 2.8e-18 94.7 62 83.9
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 6.3e-18 93.6 59 81.4
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 1.1e-17 92.8 62 79.0
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.4e-17 92.4 57 84.2
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 1.4e-17 92.4 68 76.5
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.8e-17 92.0 68 76.5
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.8e-17 92.0 68 76.5
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 2.4e-17 91.7 67 80.6
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 3.1e-17 91.3 60 76.7
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 4.1e-17 90.9 58 86.2
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 4.1e-17 90.9 59 78.0
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 5.3e-17 90.5 60 86.7
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 5.3e-17 90.5 68 72.1
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 1.2e-16 89.4 68 77.9
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 2.7e-16 88.2 68 72.1
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 3.5e-16 87.8 66 75.8
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 3.5e-16 87.8 66 75.8
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.5e-16 87.8 59 76.3
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.5e-16 87.4 57 80.7
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 4.5e-16 87.4 65 73.8
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 4.5e-16 87.4 56 80.4
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.7e-16 86.7 58 77.6
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 7.7e-16 86.7 57 80.7
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 1.0e-15 86.3 59 74.6
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-15 83.6 68 67.6
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 6.5e-15 83.6 68 67.6
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 8.5e-15 83.2 59 72.9
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.9e-14 82.0 59 71.2
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 1.9e-14 82.0 69 71.0
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 2.5e-14 81.6 57 77.2
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 4.2e-14 80.9 48 79.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 5.5e-14 80.5 59 76.3
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 9.4e-14 79.7 69 69.6
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 2.1e-13 78.6 55 76.4
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 6.1e-13 77.0 62 66.1
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.5e-11 72.4 45 84.4
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 4.1e-09 64.3 65 60.0
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 5.4e-09 63.9 60 60.0
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.0e-08 62.0 59 61.0
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 2.9e-07 58.2 48 70.8


User provided reference genes

Program Settings