Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC45t60893H Brassica oleracea HOM05D008299 ORTHO05D010400 1.1e-29 132.5 62 100.0
C06p23160 Brassica napus HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
C09p24750 Brassica napus HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BolSC29t60493H Brassica oleracea HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BolSC37t60783H Brassica oleracea HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BolSC44t60837H Brassica oleracea HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BolSC49t61213H Brassica oleracea HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BraSC103t45416Z Brassica rapa HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BraSC103t45438Z Brassica rapa HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BraSC143t45671Z Brassica rapa HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BraSC25t45895Z Brassica rapa HOM05D008299 ORTHO05D010400 4.4e-26 120.6 56 100.0
BraSC48t46294Z Brassica rapa HOM05D008299 ORTHO05D010400 1.8e-24 115.2 56 96.4
BraSC48t46311Z Brassica rapa HOM05D008299 ORTHO05D010400 1.8e-24 115.2 56 96.4
BraSC48t46344Z Brassica rapa HOM05D008299 ORTHO05D010400 1.8e-24 115.2 56 96.4
Thhalv10003089m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 4.1e-24 114.0 56 94.6
ATCG00870 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.4e-24 113.6 56 94.6
ATCG01270 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.4e-24 113.6 56 94.6
CARHR282310 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.4e-24 113.6 56 94.6
CARHR282550 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.4e-24 113.6 56 94.6
Thhalv10012154m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 1.6e-23 112.1 56 92.9
AL9U12040 Arabidopsis lyrata HOM05D008299 ORTHO05D010400 1.1e-21 105.9 51 96.1
BolC2t08923H Brassica oleracea HOM05D008299 ORTHO05D010400 5.6e-21 103.6 49 98.0
BraSC138t45545Z Brassica rapa HOM05D008299 ORTHO05D010400 4.4e-18 94.0 46 93.5
BraSC59t46562Z Brassica rapa HOM05D008299 ORTHO05D010400 9.8e-18 92.8 46 93.5
BraSC58t46447Z Brassica rapa HOM05D008299 ORTHO05D010400 1.7e-17 92.0 43 100.0
BolSC29t60562H Brassica oleracea HOM05D008299 ORTHO05D010400 1.9e-16 88.6 41 100.0
BraSC54t46357Z Brassica rapa HOM05D008299 ORTHO05D010400 4.1e-16 87.4 44 93.2
Gohir.1Z050502 Gossypium hirsutum HOM05D008299 ORTHO05D010400 4.1e-16 87.4 44 93.2
Gohir.D02G117444 Gossypium hirsutum HOM05D008299 ORTHO05D010400 4.1e-16 87.4 44 93.2
MD11G1013500 Malus domestica HOM05D008299 ORTHO05D010400 5.0e-14 80.5 40 92.5
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 1.9e-13 78.6 51 72.5
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 1.9e-13 78.6 51 72.5
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 7.3e-13 76.6 50 72.0
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 7.3e-13 76.6 50 72.0
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 1.6e-12 75.5 50 70.0
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 6.2e-12 73.6 50 70.0
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.4e-11 72.4 50 68.0
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 1.8e-11 72.0 50 68.0
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 3.1e-11 71.2 60 63.3
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 1.2e-10 69.3 42 73.8
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.2e-10 69.3 47 66.0
CAN.G1178.2 Capsicum annuum HOM05D008299 ORTHO05D010400 2.6e-10 68.2 34 88.2
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 5.8e-10 67.0 60 56.7
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.5e-10 66.6 50 62.0
BolSC37t60803H Brassica oleracea HOM05D008299 ORTHO05D103952 2.2e-09 65.1 64 56.2
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 6.0e-07 57.0 24 100.0


User provided reference genes

Program Settings