Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC44t60832H Brassica oleracea HOM05D008016 ORTHO05D010588 1.4e-43 179.1 82 100.0
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 4.6e-39 164.1 83 95.2
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 4.6e-39 164.1 83 95.2
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 4.8e-36 154.1 83 92.8
BolSC47t61058H Brassica oleracea HOM05D008016 ORTHO05D010588 1.1e-32 142.9 88 80.7
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 8.1e-28 126.7 81 75.3
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 6.9e-27 123.6 85 71.8
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 7.6e-26 120.2 81 72.8
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 8.7e-22 106.7 57 89.5
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 4.0e-19 97.8 82 64.6
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 4.0e-19 97.8 82 64.6
BraSC58t46467Z Brassica rapa HOM05D008016 ORTHO05D010588 1.5e-18 95.9 48 97.9
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 7.6e-18 93.6 61 72.1
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 1.1e-16 89.7 101 53.5
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 1.3e-14 82.8 61 67.2
arahy.Tifrunner.gnm1.ann1.PRQI1Y Arachis hypogaea HOM05D008016 ORTHO05D010588 1.9e-13 79.0 75 57.3
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 6.2e-12 73.9 82 51.2
arahy.Tifrunner.gnm1.ann1.V4KXIX Arachis hypogaea HOM05D009726 ORTHO05D010588 8.2e-12 73.6 62 62.9
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 6.9e-11 70.5 87 49.4
Nitab4.5_0004841g0100 Nicotiana tabacum HOM05D008016 ORTHO05D010055 4.5e-10 67.8 41 78.0
arahy.Tifrunner.gnm1.ann1.27WM5S Arachis hypogaea HOM05D009726 ORTHO05D010588 2.2e-09 65.5 73 47.9
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 6.5e-09 63.9 88 44.3
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.1e-08 60.5 44 72.7
BNapus_Darmor_BZH_scaffold_69p00020 Brassica napus HOM05D008016 ORTHO05D010588 2.1e-07 58.9 46 63.0
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 2.1e-07 58.9 46 63.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 2.1e-07 58.9 46 63.0
CARHR282370 Cardamine hirsuta HOM05D008016 ORTHO05D010588 2.1e-07 58.9 46 63.0
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.0e-06 55.1 24 95.8
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 6.7e-06 53.9 27 92.6
arahy.Tifrunner.gnm1.ann1.T4T886 Arachis hypogaea HOM05D009726 ORTHO05D010588 8.7e-06 53.5 44 61.4


User provided reference genes

Program Settings