Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC35t60740H Brassica oleracea HOM05D008747 ORTHO05D010943 2.4e-30 134.8 66 100.0
BNapus_Darmor_BZH_scaffold_287p00210 Brassica napus HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
C06p22940 Brassica napus HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
C06p23050 Brassica napus HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC29t60478H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC29t60599H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC35t60658H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC46t61009H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC46t61026H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BolSC47t61085H Brassica oleracea HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BraSC138t45564Z Brassica rapa HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BraSC25t45854Z Brassica rapa HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BraSC58t46433Z Brassica rapa HOM05D008747 ORTHO05D010943 8.8e-25 116.3 66 92.4
BraSC103t45476Z Brassica rapa HOM05D008747 ORTHO05D010943 8.3e-23 109.8 66 87.9
C04p42960 Brassica napus HOM05D008747 ORTHO05D010943 9.1e-22 106.3 66 84.8
C02p28710 Brassica napus HOM05D008747 ORTHO05D010943 2.3e-20 101.7 66 80.3
BraSC58t46494Z Brassica rapa HOM05D008747 ORTHO05D010943 4.2e-19 97.4 69 82.6
Lalb_Chr07g0192051 Lupinus albus HOM05D008747 ORTHO05D010943 3.4e-16 87.8 44 93.2
Glyma.14G213500 Glycine max HOM05D008747 ORTHO05D010943 9.8e-16 86.3 44 90.9
Gohir.A12G229300 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.7e-15 84.3 44 90.9
Gohir.D01G102008 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.7e-15 84.3 44 90.9
Gohir.D12G107700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.7e-15 84.3 44 90.9
Gohir.A03G081900 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.4e-14 82.4 44 88.6
Gohir.A06G008400 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.4e-14 82.4 44 88.6
Phvul.002G090400 Phaseolus vulgaris HOM05D008747 ORTHO05D010943 1.4e-14 82.4 44 88.6
ATCG00065 Arabidopsis thaliana HOM05D008747 ORTHO05D010943 3.1e-14 81.3 38 100.0
Gohir.D06G104700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.2e-13 79.3 44 86.4
Gohir.D07G185800 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.0e-13 78.6 44 81.8
Solyc00g500069.1 Solanum lycopersicum HOM05D008747 ORTHO05D010943 2.0e-13 78.6 37 100.0
Gohir.D06G113700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 5.9e-13 77.0 44 84.1
Gohir.D07G175050 Gossypium hirsutum HOM05D008747 ORTHO05D010943 5.9e-13 77.0 39 92.3
Potri.001G305350 Populus trichocarpa HOM05D008747 ORTHO05D010943 7.8e-13 76.6 45 82.2
arahy.Tifrunner.gnm1.ann1.2D3TTC Arachis hypogaea HOM05D008747 ORTHO05D010943 1.3e-12 75.9 36 97.2
arahy.Tifrunner.gnm1.ann1.HJLG3A Arachis hypogaea HOM05D008747 ORTHO05D010943 1.3e-12 75.9 36 97.2
Gohir.D01G169000 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.3e-12 75.9 44 84.1
Gohir.D06G125250 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.3e-12 75.1 44 79.5
arahy.Tifrunner.gnm1.ann1.97L4DF Arachis hypogaea HOM05D008747 ORTHO05D010943 5.0e-12 73.9 35 97.1
arahy.Tifrunner.gnm1.ann1.VB0WZA Arachis hypogaea HOM05D008747 ORTHO05D010943 1.1e-11 72.8 36 94.4
Gohir.D01G169110 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.9e-11 72.0 42 83.3
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 5.6e-11 70.5 65 60.0
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 5.6e-11 70.5 37 89.2
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 4.9e-07 57.4 34 76.5
Peaxi162Scf01751g00007 Petunia axillaris HOM05D008747 ORTHO05D010943 4.9e-07 57.4 27 100.0
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.4e-06 55.1 34 73.5


User provided reference genes

Program Settings