Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC33t60634H Brassica oleracea HOM05D012304 ORTHO05D010377 2.9e-139 498.8 302 100.0
BraA02t07692Z Brassica rapa HOM05D012304 ORTHO05D010377 9.3e-130 467.2 302 95.7
BcaC03g16452 Brassica carinata HOM05D012304 ORTHO05D010377 3.5e-129 465.3 302 95.4
C02p42700 Brassica napus HOM05D012304 ORTHO05D010377 3.5e-129 465.3 302 95.4
A02p26830 Brassica napus HOM05D012304 ORTHO05D010377 4.5e-124 448.4 309 91.6
BcaB05g23938 Brassica carinata HOM05D012304 ORTHO05D010377 2.9e-91 339.3 305 64.6
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 1.3e-83 313.9 306 61.4
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 4.0e-72 275.8 306 56.2
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 2.0e-71 273.5 306 55.6
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 1.6e-65 253.8 306 53.9
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 1.9e-61 240.4 309 52.8
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 8.7e-43 178.3 314 42.0
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 8.7e-35 151.8 313 35.1
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 7.1e-29 132.1 191 46.1
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 1.1e-08 65.1 113 32.7
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 1.8e-08 64.3 117 36.8
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 5.3e-08 62.8 285 26.0
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 2.0e-07 60.8 114 33.3
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.0e-06 58.5 105 34.3
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 6.5e-06 55.8 105 33.3


User provided reference genes

Program Settings