Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 3.0e-88 328.6 177 100.0
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 1.8e-85 319.3 177 96.0
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 1.2e-84 316.6 177 96.0
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 2.7e-84 315.5 177 95.5
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 5.0e-83 311.2 177 94.4
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 8.3e-78 293.9 177 87.0
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 8.3e-78 293.9 177 87.0
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 8.3e-78 293.9 177 87.0
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.6e-76 289.7 177 85.9
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 2.0e-76 289.3 177 87.0
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 3.5e-76 288.5 177 85.9
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.9e-76 287.7 177 85.3
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 5.0e-75 284.6 177 84.7
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 7.3e-74 280.8 177 83.1
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 9.5e-74 280.4 177 83.6
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 2.8e-73 278.9 177 84.7
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 6.1e-73 277.7 177 83.6
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 6.1e-73 277.7 177 83.6
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 8.0e-73 277.3 177 81.9
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 1.0e-72 276.9 177 84.7
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 1.4e-72 276.6 177 83.1
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 1.4e-72 276.6 177 83.1
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.4e-72 276.6 177 83.1
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.8e-72 276.2 176 83.5
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 6.8e-72 274.2 176 83.0
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 1.2e-71 273.5 177 83.1
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 9.8e-71 270.4 177 80.8
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 9.8e-71 270.4 177 80.8
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 9.8e-71 270.4 177 81.9
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 2.4e-69 265.8 177 79.1
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 3.2e-69 265.4 177 80.2
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 2.0e-68 262.7 177 79.1
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 4.6e-68 261.5 177 79.7
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 1.3e-67 260.0 177 80.2
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.3e-67 259.2 153 86.3
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 1.5e-66 256.5 176 80.1
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 6.8e-64 247.7 162 81.5
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.2e-63 246.9 162 79.6
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 3.7e-62 241.9 177 74.0
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.1e-59 231.5 152 81.6
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 3.1e-56 222.2 124 96.0
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 5.1e-51 204.9 109 100.0
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 5.1e-51 204.9 109 100.0
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 5.1e-51 204.9 109 100.0
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 5.1e-51 204.9 109 100.0
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.1e-51 204.9 161 72.0
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 1.5e-50 203.4 109 99.1
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.5e-50 203.4 137 77.4
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 2.8e-49 199.1 141 74.5
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-46 190.3 99 100.0
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 3.2e-45 185.7 150 70.7
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 1.0e-43 180.6 93 100.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-43 180.3 98 99.0
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 1.1e-42 177.2 100 97.0
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 5.6e-42 174.9 128 76.6
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 2.8e-41 172.6 117 76.1
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 8.1e-41 171.0 118 73.7
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 3.4e-39 165.6 110 85.5
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.4e-39 165.2 99 82.8
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 2.9e-38 162.5 99 82.8
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 6.4e-38 161.4 119 73.1
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 8.4e-38 161.0 99 80.8
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.4e-37 160.2 163 59.5
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 3.5e-36 155.6 84 100.0
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 3.9e-35 152.1 177 55.9
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 1.5e-34 150.2 157 60.5
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 1.3e-33 147.1 75 97.3
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.6e-33 145.6 98 77.6
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.1e-32 142.5 94 75.5
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.4e-29 133.7 96 71.9
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 5.4e-29 131.7 84 85.7
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.8e-27 126.7 76 85.5
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-27 124.8 74 78.4
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-27 124.8 74 78.4
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.9e-26 123.2 85 80.0
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 2.8e-25 119.4 75 86.7
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 3.1e-24 115.9 84 77.4
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 4.9e-22 108.6 56 98.2
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 4.9e-22 108.6 60 91.7
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 4.9e-22 108.6 176 44.3
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 2.1e-20 103.2 74 77.0
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.1e-20 103.2 74 77.0
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.1e-20 103.2 74 77.0
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 7.9e-20 101.3 83 73.5
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 1.0e-19 100.9 67 73.1
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 2.3e-19 99.8 82 69.5
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 1.1e-18 97.4 65 78.5
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 2.0e-15 86.7 87 66.7
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 6.5e-14 81.6 99 45.5
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 1.1e-13 80.9 48 85.4
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-12 76.6 61 68.9
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 1.3e-09 67.4 62 61.3
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 4.8e-09 65.5 69 58.0
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 5.0e-06 55.5 42 71.4
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 6.5e-06 55.1 40 67.5


User provided reference genes

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