Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p29590 Brassica napus HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BolSC29t60466H Brassica oleracea HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BolSC29t60588H Brassica oleracea HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BolSC35t60751H Brassica oleracea HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BolSC47t61098H Brassica oleracea HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BraSC25t45847Z Brassica rapa HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BraSC25t45867Z Brassica rapa HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BraSC58t46421Z Brassica rapa HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BraSC59t46592Z Brassica rapa HOM05D008601 ORTHO05D010814 1.0e-12 75.5 38 100.0
BolSC35t60645H Brassica oleracea HOM05D008601 ORTHO05D010814 1.3e-12 75.1 37 100.0
AL2G21540 Arabidopsis lyrata HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
ATCG00510 Arabidopsis thaliana HOM05D008601 ORTHO05D010814 1.7e-12 74.7 38 97.4
BolC9t55820H Brassica oleracea HOM05D008601 ORTHO05D010814 8.4e-12 72.4 37 97.3
BolC9t58297H Brassica oleracea HOM05D008601 ORTHO05D010814 1.1e-11 72.0 38 97.4
C09p54220 Brassica napus HOM05D008601 ORTHO05D010814 3.2e-11 70.5 38 94.7
C09p54260 Brassica napus HOM05D008601 ORTHO05D010814 3.2e-11 70.5 38 94.7
BolSC49t61184H Brassica oleracea HOM05D008601 ORTHO05D010814 4.2e-11 70.1 37 94.6
BolSC46t60999H Brassica oleracea HOM05D008601 ORTHO05D010814 9.3e-11 68.9 37 91.9
BolSC46t61036H Brassica oleracea HOM05D008601 ORTHO05D010814 9.3e-11 68.9 37 91.9
A06p23210 Brassica napus HOM05D008601 ORTHO05D010814 4.6e-10 66.6 33 100.0
Potri.013G162500 Populus trichocarpa HOM05D008601 ORTHO05D010814 4.6e-10 66.6 38 86.8
C09p54280 Brassica napus HOM05D008601 ORTHO05D010814 1.0e-09 65.5 37 89.2
BolSC45t60952H Brassica oleracea HOM05D008601 ORTHO05D010814 1.3e-09 65.1 33 97.0
PSO548G0030 Papaver somniferum HOM05D008601 ORTHO05D010814 6.7e-09 62.8 36 88.9
BraA10t43927Z Brassica rapa HOM05D008601 ORTHO05D010814 1.1e-08 62.0 36 91.7
PGR111G0070 Punica granatum HOM05D008601 ORTHO05D010814 1.5e-08 61.6 31 93.5
GSVIVG01030618001 Vitis vinifera HOM05D008601 ORTHO05D010814 1.5e-08 61.6 33 90.9
Gohir.1Z050366 Gossypium hirsutum HOM05D008601 ORTHO05D010814 1.9e-08 61.2 38 78.9
Gohir.A07G163663 Gossypium hirsutum HOM05D008601 ORTHO05D010814 1.9e-08 61.2 38 78.9
Lalb_Chr22g0360781 Lupinus albus HOM05D008601 ORTHO05D010814 1.9e-08 61.2 32 90.6
Glyma.15G003800 Glycine max HOM05D008601 ORTHO05D010814 3.3e-08 60.5 33 84.8
Nn3g19077 Nelumbo nucifera HOM05D008601 ORTHO05D010814 3.3e-08 60.5 36 83.3
Gorai.004G112900 Gossypium raimondii HOM05D008601 ORTHO05D010814 5.7e-08 59.7 37 75.7
CAN.G1569.13 Capsicum annuum HOM05D008601 ORTHO05D010814 7.4e-08 59.3 31 90.3
Solyc07g024040.2 Solanum lycopersicum HOM05D008601 ORTHO05D010814 1.3e-07 58.5 31 90.3
Glyma.10G208900 Glycine max HOM05D008601 ORTHO05D010814 2.1e-07 57.8 33 81.8
Potri.016G094033 Populus trichocarpa HOM05D008601 ORTHO05D010814 2.8e-07 57.4 37 75.7
Nitab4.5_0001170g0140 Nicotiana tabacum HOM05D008601 ORTHO05D010814 3.7e-07 57.0 31 87.1
CAN.G212.8 Capsicum annuum HOM05D008601 ORTHO05D010814 4.8e-07 56.6 31 83.9
Gorai.004G118500 Gossypium raimondii HOM05D008601 ORTHO05D010814 1.1e-06 55.5 38 73.7
Gorai.012G112500 Gossypium raimondii HOM05D008601 ORTHO05D010814 1.4e-06 55.1 38 71.1
DCAR_032494 Daucus carota HOM05D008601 ORTHO05D010814 1.8e-06 54.7 35 74.3
Glyma.17G173700 Glycine max HOM05D008601 ORTHO05D010814 1.8e-06 54.7 33 81.8
Gohir.D06G120350 Gossypium hirsutum HOM05D008601 ORTHO05D010814 6.9e-06 52.8 33 78.8


User provided reference genes

Program Settings