Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60525H Brassica oleracea HOM05D000216 ORTHO05D004083 3.1e-40 167.9 79 100.0
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 1.3e-11 72.8 48 66.7
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 2.8e-09 65.1 42 85.7
Aa31csc39G180 Aethionema arabicum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
AL2G20960 Arabidopsis lyrata HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
ATCG00140 Arabidopsis thaliana HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BcaC05g28803 Brassica carinata HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BNapus_Darmor_BZH_scaffold_253p00030 Brassica napus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolC2t10573H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolSC29t60570H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolSC37t60771H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolSC44t60845H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolSC45t60879H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BolSC46t60984H Brassica oleracea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BraSC143t45678Z Brassica rapa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
BraSC151t45692Z Brassica rapa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CSS0029618 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CAN.G1167.13 Capsicum annuum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CAN.G1167.14 Capsicum annuum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CAN.G877.3 Capsicum annuum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CAN.G939.11 Capsicum annuum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
CARHR281890 Cardamine hirsuta HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
AUR62012106 Chenopodium quinoa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
AUR62043346 Chenopodium quinoa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
COL.COLO4_00534 Corchorus olitorius HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
MELO3C028037.2 Cucumis melo HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
MELO3C034728.2 Cucumis melo HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
DCAR_032471 Daucus carota HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Migut.D01336 Erythranthe guttata HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Gohir.A01G140039 Gossypium hirsutum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Gohir.A13G095800 Gossypium hirsutum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Gorai.002G196100 Gossypium raimondii HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
HanXRQChr00c0601g0576501 Helianthus annuus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
HanXRQChr08g0210211 Helianthus annuus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
HanXRQChr11g0326641 Helianthus annuus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
HanXRQChr13g0415491 Helianthus annuus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
HanXRQCPg0579831 Helianthus annuus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Hma1.2p1_0414F.1_g147695 Hydrangea macrophylla HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Lsat_1_v5_gn_1_38660 Lactuca sativa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
LjContig00318g0027021 Lotus japonicus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
LjContig00489g0003457 Lotus japonicus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Lalb_Chr00c31g0408381 Lupinus albus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Lalb_Chr00c45g0412721 Lupinus albus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Lalb_Chr08g0232631 Lupinus albus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
MD15G1134000 Malus domestica HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Nitab4.5_0000619g0110 Nicotiana tabacum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Oeu015531.1 Olea europaea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Oeu037367.1 Olea europaea HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
PSO548G0075 Papaver somniferum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Peaxi162Scf00081g00173 Petunia axillaris HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Peaxi162Scf00379g00086 Petunia axillaris HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Potri.013G138490 Populus trichocarpa HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
PGR111G0043 Punica granatum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
RcHm_v2.0_CPg0502441 Rosa chinensis HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
SabraPtG0000900 Salix brachista HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Sed0011722 Sechium edule HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Sed0017572 Sechium edule HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Sed0017719 Sechium edule HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Hund19315 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund23974 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27453 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27641 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27671 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27698 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27743 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27765 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27806 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27823 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27839 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27930 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund27945 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28017 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28059 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28084 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28124 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28130 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28141 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28162 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28188 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28209 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28236 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28259 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.7e-09 64.7 40 90.0
Hund28352 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28373 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28399 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28414 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28501 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28687 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28703 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28807 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28825 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28834 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28905 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund28985 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund29114 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund29198 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund29479 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund29776 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-09 64.7 40 90.0
Hund31369 Selenicereus undatus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Hund31430 Selenicereus undatus HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Solyc09g059660.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 3.7e-09 64.7 42 85.7
TWI34G0859 Tripterygium wilfordii HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
unitig_91.g26493 Utricularia gibba HOM05D000216 ORTHO05D004083 3.7e-09 64.7 40 90.0
Lalb_Chr09g0335331 Lupinus albus HOM05D000216 ORTHO05D004083 4.8e-09 64.3 40 90.0
Solyc08g028860.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 8.1e-09 63.5 40 87.5
Potri.019G028500 Populus trichocarpa HOM05D000216 ORTHO05D004083 1.1e-08 63.2 40 87.5
Nn6g31741 Nelumbo nucifera HOM05D000216 ORTHO05D004083 1.8e-08 62.4 37 94.6
Sed0023443 Sechium edule HOM05D000216 ORTHO05D004083 1.8e-08 62.4 40 87.5
Medtr4g051097 Medicago truncatula HOM05D000216 ORTHO05D004083 2.4e-08 62.0 40 87.5
Psat0s5083g0040 Pisum sativum HOM05D000216 ORTHO05D004083 2.4e-08 62.0 50 72.0
Psat1g099200 Pisum sativum HOM05D000216 ORTHO05D004083 2.4e-08 62.0 40 87.5
Psat7g033720 Pisum sativum HOM05D000216 ORTHO05D004083 2.4e-08 62.0 40 87.5
Cpa.g.sc10.246 Carica papaya HOM05D000216 ORTHO05D004083 3.1e-08 61.6 40 87.5
CAN.G612.4 Capsicum annuum HOM05D000216 ORTHO05D004083 4.0e-08 61.2 40 85.0
BolC6t36193H Brassica oleracea HOM05D000216 ORTHO05D004083 5.3e-08 60.8 40 85.0
Gorai.011G099400 Gossypium raimondii HOM05D000216 ORTHO05D004083 5.3e-08 60.8 40 87.5
Gorai.011G232000 Gossypium raimondii HOM05D000216 ORTHO05D004083 5.3e-08 60.8 36 94.4
Solyc10g044550.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 5.3e-08 60.8 40 85.0
Psat0s2754g0040 Pisum sativum HOM05D000216 ORTHO05D004083 6.9e-08 60.5 40 85.0
Psat5g134720 Pisum sativum HOM05D000216 ORTHO05D004083 6.9e-08 60.5 40 85.0
Gorai.011G172900 Gossypium raimondii HOM05D000216 ORTHO05D004083 9.0e-08 60.1 40 85.0
Gohir.D10G206400 Gossypium hirsutum HOM05D000216 ORTHO05D004083 2.0e-07 58.9 37 86.5
Lsat_1_v5_gn_4_83740 Lactuca sativa HOM05D000216 ORTHO05D004083 2.6e-07 58.5 40 82.5
Migut.D01411 Erythranthe guttata HOM05D000216 ORTHO05D004083 3.4e-07 58.2 34 94.1
Gohir.D10G139200 Gossypium hirsutum HOM05D000216 ORTHO05D004083 3.4e-07 58.2 40 82.5
HanXRQChr11g0341981 Helianthus annuus HOM05D000216 ORTHO05D004083 3.4e-07 58.2 40 80.0
Sed0021232 Sechium edule HOM05D000216 ORTHO05D004083 3.4e-07 58.2 34 94.1
SMO086G0011 Selaginella moellendorffii HOM05D000216 ORTHO05D004083 3.4e-07 58.2 40 82.5
Sc12g0006390 Simmondsia chinensis HOM05D000216 ORTHO05D004083 3.4e-07 58.2 40 80.0
Solyc12g150104.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 3.4e-07 58.2 47 68.1
Gohir.D10G221700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 4.5e-07 57.8 40 82.5
Atru.chr6.501 Acer truncatum HOM05D000216 ORTHO05D004083 5.8e-07 57.4 40 80.0
Gohir.D08G103700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 5.8e-07 57.4 40 80.0
Gohir.D10G154900 Gossypium hirsutum HOM05D000216 ORTHO05D004083 5.8e-07 57.4 40 80.0
Solyc02g012025.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 5.8e-07 57.4 36 88.9
Glyma.06G229000 Glycine max HOM05D000216 ORTHO05D004083 7.6e-07 57.0 40 82.5
Glyma.19G109600 Glycine max HOM05D000216 ORTHO05D004083 7.6e-07 57.0 40 77.5
GSVIVG01021581001 Vitis vinifera HOM05D000216 ORTHO05D004083 7.6e-07 57.0 40 77.5
Gohir.D01G158000 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.3e-06 56.2 40 85.0
Gorai.004G111200 Gossypium raimondii HOM05D000216 ORTHO05D004083 1.3e-06 56.2 40 77.5
Gorai.011G251200 Gossypium raimondii HOM05D000216 ORTHO05D004083 1.7e-06 55.8 40 80.0
RcHm_v2.0_Chr4g0416071 Rosa chinensis HOM05D000216 ORTHO05D004083 2.2e-06 55.5 36 83.3
BcaC03g16701 Brassica carinata HOM05D000216 ORTHO05D004083 2.9e-06 55.1 35 85.7
Gorai.011G251300 Gossypium raimondii HOM05D000216 ORTHO05D004083 4.9e-06 54.3 37 83.8


User provided reference genes

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