Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60522H Brassica oleracea HOM05D008622 ORTHO05D010757 3.2e-30 134.4 67 100.0
BolSC49t61205H Brassica oleracea HOM05D008622 ORTHO05D010757 3.9e-28 127.5 68 97.1
C06p21400 Brassica napus HOM05D008622 ORTHO05D010757 8.1e-26 119.8 60 96.7
BolSC37t60776H Brassica oleracea HOM05D008622 ORTHO05D010757 8.1e-26 119.8 60 96.7
BolSC45t60930H Brassica oleracea HOM05D008622 ORTHO05D010757 8.1e-26 119.8 60 96.7
BraSC25t45888Z Brassica rapa HOM05D008622 ORTHO05D010757 8.1e-26 119.8 60 96.7
BraSC59t46518Z Brassica rapa HOM05D008622 ORTHO05D010757 8.1e-26 119.8 60 96.7
BolSC44t60843H Brassica oleracea HOM05D008622 ORTHO05D010757 2.4e-25 118.2 58 98.3
BolSC45t60884H Brassica oleracea HOM05D008622 ORTHO05D010757 2.4e-25 118.2 58 98.3
BolSC46t60979H Brassica oleracea HOM05D008622 ORTHO05D010757 2.4e-25 118.2 58 98.3
Thhalv10001859m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 2.4e-25 118.2 60 93.3
CAN.G612.10 Capsicum annuum HOM05D008622 ORTHO05D010757 8.4e-23 109.8 60 86.7
LjContig00318g0003846 Lotus japonicus HOM05D008622 ORTHO05D010757 1.9e-22 108.6 60 83.3
Sed0001678 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-21 105.1 60 81.7
Sed0011032 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-21 105.1 60 81.7
Sed0018360 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-21 105.1 60 81.7
Glyma.15G248550 Glycine max HOM05D008622 ORTHO05D010757 4.6e-21 104.0 60 81.7
Nn020s41492 Nelumbo nucifera HOM05D008622 ORTHO05D010757 6.0e-21 103.6 61 86.9
CAN.G877.8 Capsicum annuum HOM05D008622 ORTHO05D010757 7.9e-21 103.2 60 83.3
ATCG00050 Arabidopsis thaliana HOM05D008622 ORTHO05D010757 3.0e-20 101.3 61 83.6
PSO548G0027 Papaver somniferum HOM05D008622 ORTHO05D010757 3.0e-20 101.3 61 85.2
PGR111G0016 Punica granatum HOM05D008622 ORTHO05D010757 5.1e-20 100.5 61 82.0
DCAR_032466 Daucus carota HOM05D008622 ORTHO05D010757 8.7e-20 99.8 61 82.0
Gohir.1Z050166 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.1e-17 92.8 60 78.3
CARHR281850 Cardamine hirsuta HOM05D008622 ORTHO05D010757 1.8e-17 92.0 50 86.0
Thhalv10028241m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 3.4e-16 87.8 47 89.4
HanXRQChr00c0496g0575161 Helianthus annuus HOM05D008622 ORTHO05D010757 8.4e-15 83.2 46 84.8
Gorai.012G044100 Gossypium raimondii HOM05D008622 ORTHO05D010757 1.9e-14 82.0 46 82.6
Peaxi162Scf00110g00044 Petunia axillaris HOM05D008622 ORTHO05D010757 1.9e-14 82.0 46 82.6
Gorai.003G055400 Gossypium raimondii HOM05D008622 ORTHO05D010757 3.2e-14 81.3 46 82.6
MELO3C028501.2 Cucumis melo HOM05D008622 ORTHO05D010757 4.2e-14 80.9 46 80.4
LjContig00489g0025793 Lotus japonicus HOM05D008622 ORTHO05D010757 5.5e-14 80.5 46 80.4
Glyma.16G088900 Glycine max HOM05D008622 ORTHO05D010757 1.8e-12 75.5 46 73.9
CiPaw.06G085000 Carya illinoinensis HOM05D008622 ORTHO05D010757 3.3e-11 71.2 46 73.9
Gohir.D08G095680 Gossypium hirsutum HOM05D008622 ORTHO05D010757 5.6e-11 70.5 60 63.3
Gohir.A12G078500 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.3e-10 69.3 40 80.0
BraSC58t46475Z Brassica rapa HOM05D008622 ORTHO05D010757 9.0e-09 63.2 38 81.6
MCO08G152 Micromonas commoda HOM05D003175 ORTHO05D010757 2.6e-08 61.6 61 50.8
Cre12.g494450 Chlamydomonas reinhardtii HOM05D003175 ORTHO05D010757 3.4e-08 61.2 60 50.0
Gorai.001G180700 Gossypium raimondii HOM05D008622 ORTHO05D010757 4.5e-08 60.8 33 81.8
Migut.H01168 Erythranthe guttata HOM05D008622 ORTHO05D010757 5.8e-08 60.5 38 71.1
Gohir.D06G105260 Gossypium hirsutum HOM05D008622 ORTHO05D010757 3.8e-07 57.8 33 75.8
CiPaw.01G059700 Carya illinoinensis HOM05D008622 ORTHO05D010757 1.4e-06 55.8 42 66.7


User provided reference genes

Program Settings