Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60447H Brassica oleracea HOM05D005015 ORTHO05D005696 1.6e-49 199.1 100 100.0
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 1.3e-43 179.5 94 98.9
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 1.3e-43 179.5 94 98.9
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 1.3e-43 179.5 94 98.9
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 1.3e-43 179.5 94 98.9
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 1.9e-42 175.6 94 95.7
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 4.6e-41 171.0 95 94.7
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 7.8e-41 170.2 96 96.9
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 2.5e-39 165.2 87 98.9
BraSC140t45611Z Brassica rapa HOM05D005015 ORTHO05D005696 4.3e-39 164.5 92 93.5
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 5.6e-39 164.1 94 91.5
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 8.1e-38 160.2 93 91.4
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 3.1e-37 158.3 94 88.3
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 6.8e-37 157.1 94 87.2
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 3.2e-34 148.3 94 83.0
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 1.0e-32 143.3 94 79.8
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 1.0e-32 143.3 94 80.9
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 3.0e-32 141.7 94 78.7
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 3.0e-32 141.7 94 78.7
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 6.6e-32 140.6 94 79.8
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 1.1e-31 139.8 94 80.9
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 5.6e-31 137.5 93 78.5
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-29 132.5 95 74.7
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 5.3e-29 131.0 94 74.5
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 5.3e-29 131.0 94 75.5
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 6.9e-29 130.6 94 75.5
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 6.9e-29 130.6 94 75.5
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 6.9e-29 130.6 94 75.5
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 6.9e-29 130.6 94 75.5
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 6.9e-29 130.6 94 75.5
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 6.9e-29 130.6 101 74.3
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 1.5e-28 129.4 94 73.4
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 2.0e-28 129.0 94 74.5
BraSC151t45691Z Brassica rapa HOM05D005015 ORTHO05D005696 2.6e-28 128.6 69 92.8
BraSC179t45790Z Brassica rapa HOM05D005015 ORTHO05D005696 2.6e-28 128.6 86 87.2
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 4.4e-28 127.9 96 72.9
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 4.4e-28 127.9 127 59.8
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 7.6e-28 127.1 94 73.4
Gohir.D10G206350 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.7e-27 125.9 93 71.0
BolSC44t60844H Brassica oleracea HOM05D005015 ORTHO05D005696 2.2e-27 125.6 77 90.9
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 3.2e-26 121.7 102 66.7
Gorai.011G231900 Gossypium raimondii HOM05D005015 ORTHO05D005696 1.7e-24 115.9 94 66.0
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 2.5e-23 112.1 94 66.0
Solyc10g044535.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 2.9e-19 98.6 99 58.6
PSO548G0131 Papaver somniferum HOM05D005015 ORTHO05D005696 2.4e-18 95.5 48 93.8
Migut.D01335 Erythranthe guttata HOM05D005015 ORTHO05D005696 9.3e-18 93.6 48 91.7
Sed0007878 Sechium edule HOM05D005015 ORTHO05D005696 1.2e-17 93.2 94 56.4
Hma1.2p1_0414F.1_g147700 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 1.3e-16 89.7 48 87.5
Gohir.D01G157951 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.8e-16 89.4 48 87.5
HanXRQChr00c0300g0573221 Helianthus annuus HOM05D005015 ORTHO05D005696 5.1e-16 87.8 46 91.3
Gohir.A10G201450 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.1e-15 86.7 48 87.5
HanXRQChr00c0746g0577131 Helianthus annuus HOM05D005015 ORTHO05D005696 1.9e-15 85.9 85 57.6
BNapus_Darmor_BZH_scaffold_253p00020 Brassica napus HOM05D005015 ORTHO05D005696 5.6e-15 84.3 47 93.6
Lalb_Chr09g0335321 Lupinus albus HOM05D005015 ORTHO05D005696 1.3e-14 83.2 56 76.8
Gohir.A10G065880 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.1e-14 82.4 100 53.0
MD16G1272100 Malus domestica HOM05D005015 ORTHO05D005696 3.7e-14 81.6 47 83.0
Solyc00g500333.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 9.0e-13 77.0 93 45.2
Lalb_Chr07g0191421 Lupinus albus HOM05D005015 ORTHO05D005696 1.5e-12 76.3 50 74.0
Migut.D01410 Erythranthe guttata HOM05D005015 ORTHO05D005696 4.5e-12 74.7 62 69.4
HanXRQChr00c0272g0573041 Helianthus annuus HOM05D005015 ORTHO05D005696 4.5e-12 74.7 40 90.0
Lalb_Chr07g0192191 Lupinus albus HOM05D005015 ORTHO05D005696 3.8e-11 71.6 50 72.0
Nitab4.5_0003775g0050 Nicotiana tabacum HOM05D005015 ORTHO05D005696 3.8e-11 71.6 41 82.9
SabraPtG0000800 Salix brachista HOM05D000743 ORTHO05D000580 6.5e-11 70.9 55 74.5
HanXRQChr04g0099301 Helianthus annuus HOM05D005015 ORTHO05D005696 1.1e-10 70.1 40 90.0
Peaxi162Scf00027g00003 Petunia axillaris HOM05D005015 ORTHO05D005696 1.9e-10 69.3 55 72.7
Solyc07g021380.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.2e-09 66.6 56 67.9
Lalb_Chr03g0042651 Lupinus albus HOM05D005015 ORTHO05D005696 2.1e-09 65.9 40 85.0
Hma1.2p1_2181F.1_g316260 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 4.6e-09 64.7 38 89.5
Hma1.2p1_2181F.1_g316275 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 4.6e-09 64.7 38 89.5
CAN.G612.5 Capsicum annuum HOM05D005015 ORTHO05D005696 7.9e-09 63.9 51 72.5
arahy.Tifrunner.gnm1.ann1.KLBW9T Arachis hypogaea HOM05D005015 ORTHO05D005696 6.7e-08 60.8 39 76.9
Eucgr.H02991 Eucalyptus grandis HOM05D005015 ORTHO05D005696 1.5e-07 59.7 35 85.7
SMO086G0010 Selaginella moellendorffii HOM05D005015 ORTHO05D005696 3.3e-07 58.5 82 39.0
Lsat_1_v5_gn_3_117960 Lactuca sativa HOM05D005015 ORTHO05D005696 1.6e-06 56.2 30 93.3
Cpa.g.sc30.79 Carica papaya HOM05D005015 ORTHO05D005696 3.7e-06 55.1 30 90.0
Medtr0002s0540 Medicago truncatula HOM05D005015 ORTHO05D005696 4.8e-06 54.7 32 84.4
Hund10285 Selenicereus undatus HOM05D005015 ORTHO05D005696 6.2e-06 54.3 38 71.1
Hund30552 Selenicereus undatus HOM05D005015 ORTHO05D005696 6.2e-06 54.3 38 71.1
Hund30554 Selenicereus undatus HOM05D005015 ORTHO05D005696 6.2e-06 54.3 38 71.1


User provided reference genes

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