Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t57788H Brassica oleracea HOM05D010973 ORTHO05D014088 6.4e-180 634.0 333 100.0
C09p49360 Brassica napus HOM05D010973 ORTHO05D014088 1.2e-178 629.8 333 99.4
BcaC03g13719 Brassica carinata HOM05D010973 ORTHO05D014088 3.6e-159 565.1 299 98.7
C02p25290 Brassica napus HOM05D010973 ORTHO05D014088 5.4e-155 551.2 293 97.3
C02p31140 Brassica napus HOM05D010973 ORTHO05D014088 6.2e-143 511.1 375 77.9
BcaC07g38975 Brassica carinata HOM05D010973 ORTHO05D014088 1.3e-127 460.3 349 75.6
C08p19170 Brassica napus HOM05D010973 ORTHO05D014088 3.1e-118 429.1 320 75.6
C05p27560 Brassica napus HOM05D010973 ORTHO05D014088 2.8e-111 406.0 291 77.7
BcaC06g34072 Brassica carinata HOM05D010973 ORTHO05D014088 1.5e-101 373.6 204 96.1
BolC7t43813H Brassica oleracea HOM05D010973 ORTHO05D014088 1.1e-67 261.2 227 67.8
BolC5t31476H Brassica oleracea HOM05D010973 ORTHO05D014088 2.8e-66 256.5 227 67.4
BcaC06g34075 Brassica carinata HOM05D010973 ORTHO05D014088 9.5e-59 231.5 222 63.1
BcaC05g26903 Brassica carinata HOM05D010973 ORTHO05D014088 7.1e-54 215.3 242 57.0
BcaB03g13985 Brassica carinata HOM05D010973 ORTHO05D014088 1.4e-33 147.9 187 56.1
BcaC06g34074 Brassica carinata HOM05D010973 ORTHO05D014088 3.3e-27 126.7 72 91.7
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 4.6e-21 106.3 166 45.2
BcaC06g34073 Brassica carinata HOM05D010973 ORTHO05D095910 3.9e-20 103.2 53 96.2
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 6.7e-20 102.4 166 44.0
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 1.9e-19 100.9 126 50.0
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 5.6e-19 99.4 126 50.0
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 5.6e-19 99.4 126 50.0
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 1.3e-18 98.2 92 60.9
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 1.3e-18 98.2 92 60.9
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 6.2e-18 95.9 156 39.7
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 2.4e-17 94.0 168 41.7
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 3.1e-17 93.6 93 63.4
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 9.0e-17 92.0 93 62.4
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 1.2e-16 91.7 163 45.4
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 1.5e-16 91.3 93 62.4
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 3.4e-16 90.1 146 44.5
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 3.8e-15 86.7 146 43.2
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 1.9e-14 84.3 161 35.4
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 7.1e-14 82.4 139 41.7
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 1.2e-13 81.6 166 39.2
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 2.7e-13 80.5 86 50.0
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 6.0e-13 79.3 131 39.7
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 1.0e-12 78.6 86 48.8
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 1.3e-12 78.2 134 39.6
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 1.8e-12 77.8 166 37.3
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 6.7e-12 75.9 121 41.3
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 8.7e-12 75.5 147 37.4
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 1.1e-11 75.1 92 45.7
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 4.3e-11 73.2 85 47.1
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 5.7e-11 72.8 127 37.0
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 9.6e-11 72.0 103 41.7
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 2.1e-10 70.9 92 43.5
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 3.7e-10 70.1 78 50.0
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 1.4e-09 68.2 112 38.4
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 2.4e-09 67.4 108 38.9
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 2.4e-09 67.4 108 38.9
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 2.4e-09 67.4 108 40.7
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 3.1e-09 67.0 86 45.3
FAN21G3617 Fragaria x ananassa HOM05D002316 ORTHO05D002280 6.9e-09 65.9 110 40.0
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 6.9e-09 65.9 108 38.0
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 9.0e-09 65.5 106 40.6
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 1.2e-08 65.1 121 34.7
Potri.011G112300 Populus trichocarpa HOM05D002316 ORTHO05D002280 1.5e-08 64.7 108 38.0
AUR62038474 Chenopodium quinoa HOM05D002316 ORTHO05D002280 2.6e-08 63.9 109 34.9
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 2.6e-08 63.9 104 38.5
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 2.6e-08 63.9 131 35.9
Oeu051116.1 Olea europaea HOM05D002316 ORTHO05D002280 4.5e-08 63.2 89 42.7
PSO063G2003 Papaver somniferum HOM05D002478 ORTHO05D002280 7.6e-08 62.4 156 32.1
EL10Ac4g08303 Beta vulgaris HOM05D002316 ORTHO05D002280 1.0e-07 62.0 90 38.9
Duzib213G0761 Durio zibethinus HOM05D002316 ORTHO05D002280 1.3e-07 61.6 70 48.6
MD11G1260000 Malus domestica HOM05D002316 ORTHO05D002280 1.3e-07 61.6 112 37.5
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 1.7e-07 61.2 107 34.6
ATR0733G115 Amborella trichopoda HOM05D002316 ORTHO05D002280 2.2e-07 60.8 101 39.6
Hma1.2p1_0607F.1_g188170 Hydrangea macrophylla HOM05D002316 ORTHO05D002280 2.2e-07 60.8 88 37.5
TAR624G0302 Trochodendron aralioides HOM05D002316 ORTHO05D002280 2.2e-07 60.8 104 38.5
Migut.H01980 Erythranthe guttata HOM05D002316 ORTHO05D002280 3.8e-07 60.1 134 33.6
THA.LOC104810445 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 3.8e-07 60.1 110 34.5
Cc05_g11320 Coffea canephora HOM05D002316 ORTHO05D002280 5.0e-07 59.7 100 39.0
PGR031G2525 Punica granatum HOM05D002316 ORTHO05D002280 6.5e-07 59.3 110 33.6
PSO782G0144 Papaver somniferum HOM05D002478 ORTHO05D002280 8.4e-07 58.9 155 31.6
Eucgr.F03256 Eucalyptus grandis HOM05D002316 ORTHO05D002280 1.1e-06 58.5 93 39.8
HanXRQChr12g0373471 Helianthus annuus HOM05D002316 ORTHO05D002280 1.4e-06 58.2 85 37.6
vmacro11915 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 1.4e-06 58.2 147 32.0
Haze_09346 Corylus avellana HOM05D002316 ORTHO05D002280 3.2e-06 57.0 109 33.9
FvH4_3g18610 Fragaria vesca HOM05D002316 ORTHO05D002280 4.2e-06 56.6 102 37.3
Prupe.4G170000 Prunus persica HOM05D002316 ORTHO05D002280 4.2e-06 56.6 112 36.6
Oeu061346.1 Olea europaea HOM05D002316 ORTHO05D002280 7.2e-06 55.8 77 41.6
Sc03g0010430 Simmondsia chinensis HOM05D002316 ORTHO05D002280 7.2e-06 55.8 99 37.4
Ciclev10008352m.g Citrus clementina HOM05D002316 ORTHO05D002280 9.3e-06 55.5 129 34.1


User provided reference genes

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