Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t56789H Brassica oleracea HOM05D000975 ORTHO05D003128 1.4e-37 159.1 77 100.0
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 5.3e-37 157.1 76 98.7
BolC2t09402H Brassica oleracea HOM05D000975 ORTHO05D003128 5.3e-37 157.1 76 98.7
BolC6t37338H Brassica oleracea HOM05D000975 ORTHO05D003128 5.3e-37 157.1 76 98.7
C04p40840 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-36 156.0 76 97.4
BolC4t25667H Brassica oleracea HOM05D000975 ORTHO05D003128 1.2e-36 156.0 76 97.4
BcaC05g27533 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-36 155.6 76 97.4
C05p35160 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-36 155.6 76 97.4
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 4.5e-36 154.1 76 97.4
BolC7t41597H Brassica oleracea HOM05D000975 ORTHO05D003128 4.5e-36 154.1 76 97.4
BolC4t25134H Brassica oleracea HOM05D000975 ORTHO05D003128 9.9e-36 152.9 76 97.4
BcaC04g22080 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-35 152.1 76 94.7
BcaC09g50298 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-35 152.1 76 94.7
C09p23710 Brassica napus HOM05D000975 ORTHO05D003128 1.7e-35 152.1 76 94.7
BolC5t32232H Brassica oleracea HOM05D000975 ORTHO05D003128 2.2e-35 151.8 75 96.0
C04p15970 Brassica napus HOM05D000975 ORTHO05D003128 2.9e-35 151.4 76 94.7
BcaC02g11383 Brassica carinata HOM05D000975 ORTHO05D003128 3.8e-35 151.0 76 96.1
BolC1t04213H Brassica oleracea HOM05D000975 ORTHO05D003128 4.9e-35 150.6 76 94.7
BcaB01g00464 Brassica carinata HOM05D000975 ORTHO05D003128 6.4e-35 150.2 76 94.7
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-34 149.4 78 93.6
C02p34180 Brassica napus HOM05D000975 ORTHO05D003128 1.9e-34 148.7 76 94.7
BolC2t08412H Brassica oleracea HOM05D000975 ORTHO05D000395 1.9e-34 148.7 76 94.7
BolC4t23170H Brassica oleracea HOM05D000975 ORTHO05D003128 1.9e-34 148.7 76 93.4
BraA05t21313Z Brassica rapa HOM05D000975 ORTHO05D003128 4.2e-34 147.5 76 93.4
BcaC02g08706 Brassica carinata HOM05D000975 ORTHO05D003128 5.5e-34 147.1 74 93.2
BcaC03g14808 Brassica carinata HOM05D000975 ORTHO05D003128 2.1e-33 145.2 76 94.7
BcaC05g27726 Brassica carinata HOM05D000975 ORTHO05D003128 6.0e-33 143.7 76 92.1
C04p36240 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-32 142.5 76 92.1
BolC8t47809H Brassica oleracea HOM05D000975 ORTHO05D003128 1.1e-31 139.4 68 98.5
BolC5t32460H Brassica oleracea HOM05D000975 ORTHO05D003128 3.3e-31 137.9 76 89.5
BcaC02g10515 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-28 129.0 80 81.2
BcaC04g20797 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-28 129.0 83 80.7
BcaC04g21307 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-27 125.6 82 79.3
BcaC06g35755 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-27 125.6 82 79.3
BcaB02g10294 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-26 121.7 80 68.8
BcaB02g11153 Brassica carinata HOM05D000975 ORTHO05D003128 5.5e-26 120.6 80 67.5
BcaC05g25477 Brassica carinata HOM05D000975 ORTHO05D003128 5.5e-26 120.6 80 67.5
BcaB03g16188 Brassica carinata HOM05D000975 ORTHO05D003128 2.1e-25 118.6 80 66.2
BcaB08g35626 Brassica carinata HOM05D000975 ORTHO05D003128 2.1e-25 118.6 80 68.8
BcaC02g09785 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-25 118.2 80 78.8
BcaB07g33019 Brassica carinata HOM05D000975 ORTHO05D003128 4.6e-25 117.5 80 66.2
BcaB02g11058 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-24 115.5 80 66.2
BcaB02g11446 Brassica carinata HOM05D000975 ORTHO05D003128 3.0e-24 114.8 80 63.8
BcaC02g09820 Brassica carinata HOM05D000975 ORTHO05D003128 5.1e-24 114.0 82 74.4
BcaC03g15679 Brassica carinata HOM05D000975 ORTHO05D003128 6.7e-24 113.6 54 98.1
BcaB05g21809 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-23 111.7 80 63.8
BcaB05g24454 Brassica carinata HOM05D000975 ORTHO05D003128 3.3e-23 111.3 80 63.8
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 1.3e-22 109.4 53 96.2
BcaC02g11398 Brassica carinata HOM05D000975 ORTHO05D003128 2.8e-22 108.2 52 96.2
BolC3t20043H Brassica oleracea HOM05D000975 ORTHO05D003128 2.8e-22 108.2 55 92.7
C09p33360 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-21 105.5 76 72.4
BolC9t56174H Brassica oleracea HOM05D000975 ORTHO05D003128 1.8e-21 105.5 76 72.4
BcaB03g16257 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-21 104.8 81 64.2
BolC1t02630H Brassica oleracea HOM05D000975 ORTHO05D003128 3.1e-21 104.8 76 71.1
BraA05t21232Z Brassica rapa HOM05D000975 ORTHO05D003128 7.6e-20 100.1 76 67.1
C07p21340 Brassica napus HOM05D000975 ORTHO05D003128 2.9e-19 98.2 49 91.8
BolC4t25161H Brassica oleracea HOM05D000975 ORTHO05D003128 3.8e-19 97.8 76 69.7
C03p75390 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-18 95.9 79 57.0
A01p33190 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A03p63740 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 57.0
A05p09910 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A05p27750 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A07p03460 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A08p14810 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A09p24390 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A09p29810 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A09p40900 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
BraA06t23869Z Brassica rapa HOM05D000975 ORTHO05D003128 2.5e-18 95.1 79 55.7
A02p27500 Brassica napus HOM05D000975 ORTHO05D003128 4.2e-18 94.4 79 55.7
BraA02t07778Z Brassica rapa HOM05D000975 ORTHO05D003128 4.2e-18 94.4 79 55.7
BcaB03g16067 Brassica carinata HOM05D000975 ORTHO05D003128 5.5e-18 94.0 75 60.0
BraA09t38303Z Brassica rapa HOM05D000975 ORTHO05D003128 5.5e-18 94.0 79 55.7
BcaC03g15683 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BcaC04g23000 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BcaC06g36141 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BcaC08g44256 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
A06p20310 Brassica napus HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BolC3t15621H Brassica oleracea HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BolC5t32447H Brassica oleracea HOM05D000975 ORTHO05D003128 7.2e-18 93.6 79 54.4
BcaC02g09150 Brassica carinata HOM05D000975 ORTHO05D003128 9.3e-18 93.2 79 54.4
C02p09970 Brassica napus HOM05D000975 ORTHO05D003128 9.3e-18 93.2 79 54.4
C03p87740 Brassica napus HOM05D000975 ORTHO05D003128 9.3e-18 93.2 79 54.4
BcaB01g01398 Brassica carinata HOM05D000975 ORTHO05D003128 2.1e-17 92.0 62 71.0
A06p27630 Brassica napus HOM05D000975 ORTHO05D003128 2.1e-17 92.0 79 54.4
BcaC04g20350 Brassica carinata HOM05D000975 ORTHO05D003128 3.6e-17 91.3 79 53.2
C08p14240 Brassica napus HOM05D000975 ORTHO05D003128 4.6e-17 90.9 79 54.4
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 6.1e-17 90.5 79 54.4
BcaC03g14228 Brassica carinata HOM05D000975 ORTHO05D003128 7.9e-17 90.1 79 53.2
BcaC06g34163 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-16 89.7 79 53.2
A05p31240 Brassica napus HOM05D000975 ORTHO05D003128 1.0e-16 89.7 76 50.0
C04p57190 Brassica napus HOM05D000975 ORTHO05D003128 1.0e-16 89.7 79 51.9
A01p28010 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-16 89.4 79 51.9
BcaC07g37493 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-16 89.0 78 61.5
A01p14510 Brassica napus HOM05D000975 ORTHO05D003128 3.9e-16 87.8 89 49.4
BcaC09g48472 Brassica carinata HOM05D000975 ORTHO05D003128 8.7e-16 86.7 79 51.9
BolC3t20046H Brassica oleracea HOM05D000975 ORTHO05D003128 8.7e-16 86.7 79 51.9
C07p26070 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-15 85.9 79 49.4
BcaB08g35181 Brassica carinata HOM05D000975 ORTHO05D003128 3.3e-15 84.7 58 63.8
C02p45150 Brassica napus HOM05D000975 ORTHO05D003128 5.7e-15 84.0 80 47.5
BcaC03g14966 Brassica carinata HOM05D000975 ORTHO05D003128 7.4e-15 83.6 42 88.1
BcaC03g15228 Brassica carinata HOM05D000975 ORTHO05D003128 2.2e-14 82.0 74 58.1
A07p02250 Brassica napus HOM05D000975 ORTHO05D003128 2.2e-14 82.0 71 53.5
BraA01t02644Z Brassica rapa HOM05D000975 ORTHO05D003128 2.2e-14 82.0 70 48.6
A07p22600 Brassica napus HOM05D000975 ORTHO05D003128 3.7e-14 81.3 71 53.5
BcaC06g34842 Brassica carinata HOM05D000975 ORTHO05D003128 6.3e-14 80.5 76 61.8
C07p07330 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-13 79.7 71 52.1
C07p32000 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-13 79.7 71 52.1
C09p43970 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-13 79.7 73 50.7
BolC9t55297H Brassica oleracea HOM05D000975 ORTHO05D000395 2.4e-13 78.6 76 60.5
A06p23360 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-13 78.2 70 47.1
A07p05590 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-12 76.3 67 53.7
BcaC09g49098 Brassica carinata HOM05D000975 ORTHO05D003128 2.9e-11 71.6 36 97.2
C09p39090 Brassica napus HOM05D000975 ORTHO05D003128 8.5e-11 70.1 35 100.0
BcaC06g35495 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-10 68.9 70 44.3
BcaB04g18232 Brassica carinata HOM05D000975 ORTHO05D003128 3.2e-10 68.2 52 61.5
BcaB01g01115 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-09 65.1 77 41.6
A09p24180 Brassica napus HOM05D000975 ORTHO05D003128 7.9e-09 63.5 42 57.1
C09p26470 Brassica napus HOM05D000975 ORTHO05D003128 7.9e-09 63.5 57 50.9
C04p20960 Brassica napus HOM05D000975 ORTHO05D003128 1.0e-08 63.2 42 57.1
A08p09910 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-08 62.8 57 50.9
C05p33170 Brassica napus HOM05D000975 ORTHO05D003128 5.1e-08 60.8 42 54.8
A06p23380 Brassica napus HOM05D000975 ORTHO05D003128 9.7e-07 56.6 77 36.4
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-06 56.2 79 35.4
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 2.8e-06 55.1 78 37.2
C02p45180 Brassica napus HOM05D000975 ORTHO05D003128 2.8e-06 55.1 78 37.2
C05p33140 Brassica napus HOM05D000975 ORTHO05D003128 2.8e-06 55.1 78 37.2
A01p28020 Brassica napus HOM05D000975 ORTHO05D003128 3.7e-06 54.7 77 36.4
A03p68240 Brassica napus HOM05D000975 ORTHO05D003128 3.7e-06 54.7 77 35.1
BcaB08g35625 Brassica carinata HOM05D000975 ORTHO05D003128 4.8e-06 54.3 68 38.2
A03p63360 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-06 54.3 77 35.1
A09p24160 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-06 54.3 77 35.1
A09p29830 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-06 54.3 77 35.1
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-06 54.3 77 35.1
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 6.3e-06 53.9 78 35.9
BcaC03g15685 Brassica carinata HOM05D000975 ORTHO05D003128 6.3e-06 53.9 77 33.8
A05p31270 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-06 53.9 77 35.1
BolC2t09407H Brassica oleracea HOM05D000975 ORTHO05D003128 6.3e-06 53.9 77 33.8
C08p14260 Brassica napus HOM05D000975 ORTHO05D003128 8.2e-06 53.5 77 33.8


User provided reference genes

Program Settings