Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t56665H Brassica oleracea HOM05D000353 ORTHO05D027748 4.0e-26 120.6 57 100.0
BolC5t32432H Brassica oleracea HOM05D000353 ORTHO05D000174 2.9e-16 87.8 49 79.6
BolC5t32434H Brassica oleracea HOM05D000353 ORTHO05D000174 2.9e-16 87.8 52 78.8
BcaC05g27705 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-15 84.7 45 82.2
A05p23940 Brassica napus HOM05D000353 ORTHO05D027748 2.5e-15 84.7 50 78.0
BraA05t21273Z Brassica rapa HOM05D000353 ORTHO05D027748 2.5e-15 84.7 50 78.0
BcaC08g44124 Brassica carinata HOM05D000353 ORTHO05D027748 7.2e-15 83.2 45 80.0
BraA09t38076Z Brassica rapa HOM05D000353 ORTHO05D000174 3.6e-14 80.9 49 73.5
BraA01t02637Z Brassica rapa HOM05D000353 ORTHO05D000174 7.9e-14 79.7 47 74.5
BraA09t38700Z Brassica rapa HOM05D000353 ORTHO05D000174 7.9e-14 79.7 49 71.4
C01p30610 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-13 78.2 44 77.3
C02p49720 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-13 78.2 44 77.3
BolC9t57836H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-13 78.2 44 77.3
BcaC09g49970 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-13 77.4 44 75.0
BolC1t02998H Brassica oleracea HOM05D000353 ORTHO05D000174 3.9e-13 77.4 44 75.0
A03p68330 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
A03p68730 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
A04p07180 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
A05p24020 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
A07p12890 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
A10p00020 Brassica napus HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
BolC2t10482H Brassica oleracea HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
BraA04t16943Z Brassica rapa HOM05D000353 ORTHO05D000174 5.1e-13 77.0 44 75.0
BolC3t20219H Brassica oleracea HOM05D000353 ORTHO05D000174 8.8e-13 76.3 49 67.3
C03p61110 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-12 75.9 44 75.0
BolC3t18374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-12 75.9 44 75.0
C04p43260 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-12 75.5 44 75.0
BolC2t10477H Brassica oleracea HOM05D000353 ORTHO05D000174 4.3e-12 73.9 44 72.7
BraA08t33914Z Brassica rapa HOM05D000353 ORTHO05D000174 8.2e-11 69.7 44 68.2
BolC7t41571H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-10 69.3 38 76.3
Thhalv10003082m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-08 62.4 55 47.3
C03p65000 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-07 57.8 43 53.5
BolC3t18759H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-07 57.8 43 53.5
BraA10t42806Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-07 57.8 43 53.5
A02p16270 Brassica napus HOM05D021520 ORTHO05D000174 4.2e-07 57.4 52 44.2
Thhalv10029510m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.2e-07 57.4 43 53.5
BcaC09g52243 Brassica carinata HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
A06p16970 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
C04p06370 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
C04p31400 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
C06p01070 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
BolC4t22260H Brassica oleracea HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
BraA06t24806Z Brassica rapa HOM05D000353 ORTHO05D000174 5.5e-07 57.0 43 51.2
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 9.4e-07 56.2 49 51.0
BcaB01g00985 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-06 55.8 49 42.9
BcaB06g27468 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-06 55.1 43 48.8
C05p54930 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 48 47.9
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 2.7e-06 54.7 48 47.9
Thhalv10029216m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.7e-06 53.9 43 55.8


User provided reference genes

Program Settings