Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 3.7e-160 568.2 285 100.0
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 1.4e-140 503.1 429 66.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.7e-93 346.7 244 76.6
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 8.6e-93 344.4 220 82.3
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 5.2e-90 335.1 239 76.2
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 5.4e-87 325.1 220 76.4
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.1e-86 323.2 366 54.9
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 2.3e-77 293.1 220 71.4
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 1.4e-74 283.9 365 52.6
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 7.1e-55 218.4 123 91.9
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 4.5e-49 199.1 242 47.9
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 8.4e-48 194.9 383 37.9
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 4.8e-43 179.1 199 51.3
BraA02t06822Z Brassica rapa HOM05D013280 ORTHO05D023988 5.1e-29 132.5 117 62.4
BcaC02g11661 Brassica carinata HOM05D013280 ORTHO05D023988 8.2e-27 125.2 87 77.0
BolC7t41166H Brassica oleracea HOM05D013280 ORTHO05D023988 8.0e-22 108.6 64 84.4
A01p38290 Brassica napus HOM05D013280 ORTHO05D011792 1.3e-19 101.3 120 49.2
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 1.3e-19 101.3 198 29.8
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-19 100.5 221 29.9
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 3.7e-19 99.8 164 37.8
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.6e-17 94.4 202 30.7
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.3e-16 91.3 205 30.2
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.3e-16 91.3 169 30.8
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.7e-16 90.9 205 30.2
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.7e-16 90.9 169 30.8
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 2.9e-16 90.1 192 31.2
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 6.5e-16 89.0 207 29.0
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 6.5e-16 89.0 196 29.6
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.9e-15 87.4 195 29.7
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 5.5e-15 85.9 219 27.9
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 7.2e-15 85.5 169 29.6
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 1.2e-14 84.7 161 32.3
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 1.2e-14 84.7 161 32.3
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 1.6e-14 84.3 190 28.9
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 2.1e-14 84.0 202 28.7
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 4.7e-14 82.8 197 29.4
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 6.1e-14 82.4 197 28.9
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 8.0e-14 82.0 179 34.1
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 8.0e-14 82.0 179 34.1
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 1.4e-13 81.3 110 39.1
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 6.8e-13 79.0 180 31.1
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 6.8e-13 79.0 229 27.1
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.2e-12 78.2 202 29.2
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 2.0e-12 77.4 202 28.7
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 2.0e-12 77.4 155 31.6
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 5.7e-12 75.9 152 32.2
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 7.5e-12 75.5 139 35.3
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 1.3e-11 74.7 163 32.5
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.3e-11 74.7 180 30.0
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 2.8e-11 73.6 171 29.8
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 4.8e-11 72.8 203 27.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 4.8e-11 72.8 205 26.8
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 6.3e-11 72.4 166 27.7
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 6.3e-11 72.4 166 27.7
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 6.3e-11 72.4 166 27.7
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 1.4e-10 71.2 204 31.9
BcaB04g17930 Brassica carinata HOM05D009418 ORTHO05D011792 2.4e-10 70.5 45 71.1
A03p68050 Brassica napus HOM05D009418 ORTHO05D027366 2.4e-10 70.5 92 40.2
BraA01t02667Z Brassica rapa HOM05D009418 ORTHO05D027366 2.4e-10 70.5 92 40.2
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 4.1e-10 69.7 169 28.4
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 7.0e-10 68.9 146 32.2
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.2e-09 68.2 166 26.5
BolC7t41168H Brassica oleracea HOM05D013280 ORTHO05D011792 1.2e-09 68.2 31 96.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.6e-09 67.8 166 25.3
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.6e-09 67.8 173 27.2
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 2.0e-09 67.4 165 25.5
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 2.0e-09 67.4 168 27.4
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 2.0e-09 67.4 205 25.9
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 2.7e-09 67.0 155 29.7
BcaC06g35244 Brassica carinata HOM05D005627 ORTHO05D011976 2.7e-09 67.0 141 31.2
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 2.7e-09 67.0 178 25.8
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 2.7e-09 67.0 224 26.8
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 2.7e-09 67.0 224 26.8
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 2.7e-09 67.0 178 25.8
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 2.7e-09 67.0 186 28.5
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 3.5e-09 66.6 197 24.9
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 3.5e-09 66.6 102 38.2
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 4.5e-09 66.2 226 26.1
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 4.5e-09 66.2 102 38.2
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 4.5e-09 66.2 205 24.9
BraA09t41981Z Brassica rapa HOM05D013280 ORTHO05D023988 5.9e-09 65.9 75 52.0
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 7.7e-09 65.5 204 25.5
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 7.7e-09 65.5 186 27.4
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 7.7e-09 65.5 167 28.7
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 1.7e-08 64.3 161 31.1
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 1.7e-08 64.3 183 29.0
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 2.2e-08 63.9 180 26.7
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 2.2e-08 63.9 161 29.2
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 2.2e-08 63.9 161 29.2
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 2.2e-08 63.9 164 28.7
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.2e-08 63.9 227 25.1
BcaB08g36732 Brassica carinata HOM05D009418 ORTHO05D011792 3.8e-08 63.2 92 40.2
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 3.8e-08 63.2 160 28.8
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 5.0e-08 62.8 126 27.0
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 5.0e-08 62.8 157 26.1
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 5.0e-08 62.8 126 27.0
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 5.0e-08 62.8 102 37.3
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 5.0e-08 62.8 126 27.0
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 5.0e-08 62.8 157 26.1
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 8.5e-08 62.0 157 26.1
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 8.5e-08 62.0 173 27.7
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 8.5e-08 62.0 162 27.8
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 8.5e-08 62.0 157 26.1
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 1.1e-07 61.6 141 30.5
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.1e-07 61.6 174 25.3
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 1.9e-07 60.8 159 27.0
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.9e-07 60.8 130 26.9
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 1.9e-07 60.8 148 31.8
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.9e-07 60.8 164 26.8
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 2.5e-07 60.5 167 26.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 3.2e-07 60.1 124 30.6
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 3.2e-07 60.1 207 25.1
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 4.2e-07 59.7 148 31.1
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 4.2e-07 59.7 163 31.3
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 5.5e-07 59.3 115 33.0
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 5.5e-07 59.3 180 26.7
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 5.5e-07 59.3 189 24.9
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 9.4e-07 58.5 89 37.1
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 9.4e-07 58.5 160 27.5
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 9.4e-07 58.5 126 31.7
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 9.4e-07 58.5 194 24.7
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 9.4e-07 58.5 178 26.4
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 9.4e-07 58.5 170 25.3
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 9.4e-07 58.5 136 27.9
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.2e-06 58.2 167 26.3
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.6e-06 57.8 166 24.1
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.6e-06 57.8 173 26.6
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-06 57.8 116 28.4
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.6e-06 57.8 173 26.6
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 2.1e-06 57.4 149 27.5
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.1e-06 57.4 179 23.5
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 2.7e-06 57.0 155 26.5
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 3.6e-06 56.6 125 28.0
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 3.6e-06 56.6 128 28.9
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 4.7e-06 56.2 129 25.6
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 4.7e-06 56.2 55 49.1
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 6.1e-06 55.8 135 23.7
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 6.1e-06 55.8 81 32.1
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 6.1e-06 55.8 165 25.5
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 6.1e-06 55.8 102 36.3
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 6.1e-06 55.8 102 36.3
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 8.0e-06 55.5 129 25.6


User provided reference genes

Program Settings