Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.6e-89 332.0 168 100.0
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.6e-89 332.0 168 100.0
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 4.2e-55 218.4 119 94.1
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.7e-54 215.7 114 97.4
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.7e-51 206.5 112 93.8
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 3.1e-50 202.2 104 100.0
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 5.3e-42 174.9 104 83.7
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 3.8e-40 168.7 154 64.3
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 6.5e-40 167.9 106 81.1
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 2.5e-39 166.0 95 86.3
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.0e-37 160.6 96 82.3
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 6.7e-37 157.9 108 75.0
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 6.7e-37 157.9 97 83.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.5e-36 156.8 98 78.6
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 4.4e-36 155.2 95 82.1
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 8.5e-32 141.0 97 69.1
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 3.0e-29 132.5 110 59.1
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 1.7e-27 126.7 130 53.1
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.2e-27 126.3 86 70.9
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 3.7e-27 125.6 84 67.9
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 4.8e-27 125.2 84 69.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 4.8e-27 125.2 87 67.8
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 6.3e-27 124.8 88 68.2
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 6.3e-27 124.8 112 55.4
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 8.3e-27 124.4 87 67.8
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.1e-26 124.0 89 64.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.1e-26 124.0 104 56.7
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.8e-26 123.2 86 67.4
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 4.1e-26 122.1 86 66.3
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 4.1e-26 122.1 93 61.3
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.1e-26 122.1 104 58.7
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 5.4e-26 121.7 88 67.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 9.1e-26 120.9 119 53.8
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 9.1e-26 120.9 106 57.5
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.2e-25 120.6 109 52.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.2e-25 120.6 85 65.9
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.2e-25 120.6 91 58.2
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 2.0e-25 119.8 106 57.5
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 2.0e-25 119.8 86 62.8
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.0e-25 119.8 106 57.5
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.7e-25 119.4 93 60.2
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 2.7e-25 119.4 93 60.2
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 2.7e-25 119.4 86 66.3
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 4.5e-25 118.6 107 57.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 4.5e-25 118.6 109 51.4
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 4.5e-25 118.6 96 59.4
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 5.9e-25 118.2 89 60.7
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 5.9e-25 118.2 89 60.7
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 5.9e-25 118.2 86 65.1
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 5.9e-25 118.2 106 52.8
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 7.7e-25 117.9 87 63.2
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 7.7e-25 117.9 84 66.7
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 7.7e-25 117.9 96 60.4
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.0e-24 117.5 87 60.9
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.0e-24 117.5 86 66.3
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.3e-24 117.1 98 56.1
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 1.7e-24 116.7 100 57.0
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 1.7e-24 116.7 85 63.5
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.7e-24 116.7 82 67.1
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.2e-24 116.3 87 63.2
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.9e-24 115.9 86 61.6
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 3.8e-24 115.5 99 57.6
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 3.8e-24 115.5 86 62.8
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 3.8e-24 115.5 83 65.1
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 5.0e-24 115.2 82 65.9
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 5.0e-24 115.2 82 63.4
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 5.0e-24 115.2 98 60.2
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 6.5e-24 114.8 82 64.6
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 8.5e-24 114.4 87 60.9
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 8.5e-24 114.4 109 55.0
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 8.5e-24 114.4 124 48.4
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 8.5e-24 114.4 107 55.1
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.1e-23 114.0 89 61.8
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.1e-23 114.0 113 53.1
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.5e-23 113.6 106 54.7
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.5e-23 113.6 87 60.9
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.5e-23 113.6 84 63.1
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.9e-23 113.2 106 51.9
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 3.2e-23 112.5 84 61.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.2e-23 112.5 84 61.9
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.2e-23 112.5 84 61.9
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 3.2e-23 112.5 86 61.6
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 3.2e-23 112.5 84 61.9
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.2e-22 110.5 86 60.5
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 2.7e-22 109.4 84 60.7
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 3.6e-22 109.0 107 54.2
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.6e-22 109.0 112 50.9
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 8.0e-22 107.8 84 58.3
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.4e-21 107.1 100 53.0
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 1.8e-21 106.7 100 52.0
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 2.3e-21 106.3 99 51.5
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 5.2e-21 105.1 106 51.9
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 6.8e-21 104.8 109 49.5
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 1.5e-20 103.6 89 56.2
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 2.6e-20 102.8 73 72.6
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 4.4e-20 102.1 87 55.2
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 4.4e-20 102.1 107 48.6
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.2e-19 99.8 87 54.0
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 2.2e-19 99.8 95 49.5
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 4.9e-19 98.6 80 58.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 8.3e-19 97.8 107 47.7
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.8e-18 96.7 86 48.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 5.4e-18 95.1 71 62.0
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 2.7e-17 92.8 86 46.5
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 4.5e-17 92.0 109 45.9
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 2.3e-16 89.7 77 55.8
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 3.8e-16 89.0 81 49.4
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 8.6e-16 87.8 82 56.1
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 2.8e-14 82.8 87 46.0
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 3.4e-12 75.9 63 54.0
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 2.0e-09 66.6 84 40.5
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 7.8e-09 64.7 84 35.7
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 7.8e-09 64.7 80 40.0
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 2.5e-07 59.7 84 42.9


User provided reference genes

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