Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t54626H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-62 242.7 130 100.0
BraA07t30966Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-56 220.7 133 90.2
C09p17240 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-56 220.3 148 82.4
BolC7t42461H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-55 218.8 148 83.1
C02p32630 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-50 203.0 186 61.8
BcaC05g25203 Brassica carinata HOM05D000313 ORTHO05D000065 6.0e-33 144.4 98 75.5
C07p23090 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-29 131.0 82 85.4
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-24 114.8 80 75.0
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-23 111.7 81 71.6
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-22 110.2 81 71.6
C08p02170 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-21 106.3 58 86.2
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-21 105.1 72 73.6
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-21 105.1 72 69.4
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-20 103.6 72 72.2
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-20 102.1 72 66.7
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-19 98.6 56 83.9
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-19 98.2 74 71.6
BcaC01g02399 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-19 97.8 67 71.6
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-18 94.7 56 80.4
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 7.1e-18 94.4 56 82.1
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-18 94.4 56 82.1
A10p11580 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-17 93.2 58 81.0
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-16 89.7 57 78.9
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-16 88.6 57 78.9
BcaB07g30333 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-15 86.7 57 73.7
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.3e-15 85.5 75 58.7
BraA09t39839Z Brassica rapa HOM05D000313 ORTHO05D000065 7.3e-15 84.3 76 63.2
BolC9t54482H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-15 84.0 58 70.7
BcaB05g24116 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-12 75.9 59 64.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-11 73.6 81 49.4
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-11 73.6 81 49.4
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-10 69.3 106 38.7
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-10 69.3 99 41.4
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-10 69.3 99 41.4
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-10 69.3 129 37.2
A05p33480 Brassica napus HOM05D012652 ORTHO05D018584 3.2e-10 68.9 41 78.0
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-10 68.9 81 46.9
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-10 68.6 95 41.1
BraA01t02953Z Brassica rapa HOM05D012652 ORTHO05D018584 9.3e-10 67.4 41 75.6
A09p41280 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 48 58.3
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-09 67.0 70 51.4
BcaB07g32742 Brassica carinata HOM05D000313 ORTHO05D027477 1.6e-09 66.6 59 59.3
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 93 46.2
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-09 66.2 75 45.3
A08p07480 Brassica napus HOM05D010481 ORTHO05D017550 2.7e-09 65.9 67 50.7
BraA09t36832Z Brassica rapa HOM05D012652 ORTHO05D000065 2.7e-09 65.9 41 73.2
BcaB07g33221 Brassica carinata HOM05D048909 ORTHO05D000065 3.5e-09 65.5 75 54.7
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 82 46.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-09 65.5 82 46.3
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.5e-09 65.5 75 48.0
BolC1t03816H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-09 65.1 41 78.0
BolC4t27405H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-09 65.1 41 78.0
BraA08t32767Z Brassica rapa HOM05D010481 ORTHO05D017550 6.0e-09 64.7 52 59.6
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-09 64.3 76 46.1
C02p31920 Brassica napus HOM05D014454 ORTHO05D033380 1.0e-08 63.9 94 44.7
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.5 93 44.1
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.5 93 44.1
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.2 97 42.3
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.2 93 44.1
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.8 108 39.8
C05p32080 Brassica napus HOM05D012652 ORTHO05D018584 2.3e-08 62.8 39 79.5
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 93 44.1
C06p23850 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 52 55.8
BolC5t31935H Brassica oleracea HOM05D012652 ORTHO05D018584 2.3e-08 62.8 39 79.5
BolC9t57786H Brassica oleracea HOM05D032470 ORTHO05D027477 2.3e-08 62.8 56 62.5
BcaC05g28504 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-08 62.4 94 41.5
BolC5t33306H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-08 62.4 94 41.5
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-08 62.0 93 44.1
BcaB06g26638 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-08 62.0 75 45.3
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-08 62.0 69 50.7
BcaC07g39432 Brassica carinata HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-08 62.0 77 45.5
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-08 62.0 77 45.5
C07p19990 Brassica napus HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
C08p24710 Brassica napus HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
BolC2t10736H Brassica oleracea HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
BolC7t42518H Brassica oleracea HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
BolC8t50085H Brassica oleracea HOM05D010481 ORTHO05D017627 3.9e-08 62.0 49 61.2
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-08 61.6 80 42.5
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-08 61.6 101 39.6
BcaC07g40702 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-08 61.6 48 68.8
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-08 61.6 81 42.0
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-08 61.6 96 41.7
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-08 61.6 88 43.2
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 5.1e-08 61.6 101 39.6
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 5.1e-08 61.6 88 43.2
BcaC01g05008 Brassica carinata HOM05D012652 ORTHO05D018584 6.6e-08 61.2 39 76.9
BcaC05g27722 Brassica carinata HOM05D012652 ORTHO05D018584 6.6e-08 61.2 39 76.9
C08p27490 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-08 61.2 72 44.4
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 8.7e-08 60.8 94 41.5
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 8.7e-08 60.8 94 41.5
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 8.7e-08 60.8 52 53.8
BolC8t48734H Brassica oleracea HOM05D000313 ORTHO05D000065 8.7e-08 60.8 94 41.5
BcaC07g37331 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.5 47 59.6
C08p07700 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.5 47 59.6
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.5 77 44.2
BolC6t36579H Brassica oleracea HOM05D012652 ORTHO05D000065 1.1e-07 60.5 39 76.9
BolC8t47617H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.5 47 59.6
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 60.5 77 45.5
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 60.5 88 42.0
C09p49350 Brassica napus HOM05D032470 ORTHO05D027477 1.5e-07 60.1 56 60.7
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 60.1 90 43.3
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-07 59.7 77 44.2
C03p81680 Brassica napus HOM05D010481 ORTHO05D032805 1.9e-07 59.7 52 55.8
BolC4t24339H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-07 59.7 41 73.2
C02p38590 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-07 58.9 96 39.6
C08p19870 Brassica napus HOM05D042196 ORTHO05D031843 3.3e-07 58.9 51 58.8
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.5 92 41.3
C03p55430 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.5 57 54.4
BolC2t09433H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.5 41 73.2
BraA03t14450Z Brassica rapa HOM05D000313 ORTHO05D000065 4.3e-07 58.5 90 42.2
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.2 75 41.3
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.2 95 38.9
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.2 77 42.9
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 57.8 98 38.8
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-07 57.8 102 40.2
A01p22490 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 71 50.7
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 66 51.5
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 98 38.8
BolC2t10368H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-07 57.8 52 50.0
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-07 57.8 102 40.2
BcaC01g04003 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-07 57.4 68 51.5
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-07 57.4 101 39.6
BcaC06g36447 Brassica carinata HOM05D003334 ORTHO05D000065 9.6e-07 57.4 55 47.3
BcaC07g37724 Brassica carinata HOM05D015472 ORTHO05D021961 9.6e-07 57.4 58 60.3
BcaC07g39596 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-07 57.4 78 43.6
A09p29710 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 41 70.7
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 81 38.3
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 71 46.5
C02p44680 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 101 39.6
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 71 46.5
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-07 57.4 71 45.1
BolC2t10111H Brassica oleracea HOM05D014454 ORTHO05D033380 9.6e-07 57.4 61 54.1
BraA09t38537Z Brassica rapa HOM05D000313 ORTHO05D000065 9.6e-07 57.4 41 70.7
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 9.6e-07 57.4 81 38.3
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.0 85 41.2
A03p50950 Brassica napus HOM05D000519 ORTHO05D023880 1.3e-06 57.0 70 52.9
C02p41030 Brassica napus HOM05D014454 ORTHO05D033380 1.3e-06 57.0 76 48.7
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.0 92 42.4
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.0 85 41.2
BcaB03g16374 Brassica carinata HOM05D046935 ORTHO05D039510 1.6e-06 56.6 48 60.4
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 81 43.2
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 81 39.5
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 81 39.5
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 81 39.5
BolC8t48144H Brassica oleracea HOM05D012652 ORTHO05D000065 1.6e-06 56.6 41 73.2
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-06 56.6 81 39.5
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.2 85 41.2
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.2 81 40.7
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 81 39.5
BcaC03g16503 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 50 50.0
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 55.8 81 38.3
C02p43200 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 55.8 50 50.0
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 2.8e-06 55.8 81 38.3
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.5 75 42.7
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.5 101 38.6
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.5 101 38.6
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.5 77 40.3
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 55.5 71 46.5
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 55.5 71 46.5
C06p05530 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 55.5 81 42.0
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 55.5 71 45.1
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 55.5 71 43.7
BolC3t20537H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 55.5 103 39.8
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 55.5 101 38.6
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.1 81 39.5
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.1 71 45.1
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.1 77 44.2
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.1 84 41.7
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 81 40.7
A09p63130 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 72 45.8
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 61 47.5
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-06 55.1 71 45.1
BraA09t41667Z Brassica rapa HOM05D000313 ORTHO05D000065 4.8e-06 55.1 72 45.8
BcaC04g19629 Brassica carinata HOM05D014454 ORTHO05D000065 6.2e-06 54.7 37 67.6
A02p30140 Brassica napus HOM05D000313 ORTHO05D021705 6.2e-06 54.7 94 33.0
BolC3t18308H Brassica oleracea HOM05D000519 ORTHO05D023880 6.2e-06 54.7 70 51.4
BcaB04g18160 Brassica carinata HOM05D012652 ORTHO05D000065 8.1e-06 54.3 38 71.1
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-06 54.3 101 34.7
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-06 54.3 76 39.5
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-06 54.3 81 37.0
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 8.1e-06 54.3 69 47.8
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-06 54.3 71 45.1


User provided reference genes

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