Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t54326H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-64 248.1 120 100.0
BcaC04g22883 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-46 189.9 98 94.9
C09p14250 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-31 139.8 73 93.2
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-15 86.7 73 63.0
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-15 85.1 70 64.3
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-14 82.8 75 58.7
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-14 82.8 78 56.4
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 7.5e-14 80.9 72 61.1
BcaC07g39367 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-13 80.1 72 58.3
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-13 79.0 52 73.1
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 4.8e-13 78.2 72 58.3
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-13 77.4 58 67.2
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-12 76.3 71 59.2
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-12 75.9 58 65.5
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-12 75.1 83 53.0
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 4.1e-12 75.1 76 52.6
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 5.4e-12 74.7 72 56.9
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-12 74.3 75 53.3
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-12 74.3 75 53.3
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-11 73.6 75 53.3
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-11 73.2 83 53.0
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-11 72.4 72 55.6
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-11 72.4 72 55.6
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-11 71.2 75 49.3
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-11 71.2 76 51.3
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-11 71.2 61 59.0
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 5.9e-11 71.2 58 58.6
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 7.7e-11 70.9 76 51.3
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-10 70.5 61 59.0
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-10 70.5 61 59.0
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-10 70.5 75 53.3
BraA01t04317Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-10 70.1 72 54.2
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-10 69.7 75 52.0
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.7 75 50.7
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.7 75 52.0
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.7 72 54.2
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 69.7 72 54.2
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-10 69.7 75 50.7
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-10 69.3 75 52.0
A08p06180 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-10 68.6 113 43.4
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-10 68.2 82 45.1
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-10 68.2 65 50.8
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-10 67.4 82 45.1
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-10 67.4 82 45.1
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-09 67.0 79 46.8
A04p07460 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 67.0 94 46.8
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-09 66.6 76 48.7
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-09 66.6 77 49.4
BcaB03g15072 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-09 66.2 49 65.3
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-09 66.2 55 50.9
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-09 66.2 75 50.7
A08p07610 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-09 66.2 68 54.4
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-09 66.2 72 51.4
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-09 66.2 75 49.3
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-09 65.9 75 46.7
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-09 65.9 75 46.7
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-09 65.9 75 49.3
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-09 65.9 75 49.3
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-09 65.9 75 49.3
BraA08t32776Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-09 65.9 67 53.7
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 2.5e-09 65.9 84 46.4
BcaC06g34590 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-09 65.1 61 57.4
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-09 65.1 55 56.4
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-09 64.7 59 54.2
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-09 64.7 75 49.3
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-09 64.7 75 49.3
A02p25960 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-09 64.3 57 57.9
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-09 64.3 75 48.0
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 7.2e-09 64.3 75 48.0
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-09 63.9 75 48.0
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 9.5e-09 63.9 75 46.7
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-09 63.9 75 46.7
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.5 75 48.0
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.5 67 49.3
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.5 82 42.7
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.5 79 44.3
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 63.5 68 48.5
A09p63130 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.5 66 50.0
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.5 82 42.7
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.5 67 49.3
C08p25290 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 63.5 50 60.0
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.5 82 42.7
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.5 80 46.2
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.5 65 50.8
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.5 82 42.7
BolC8t50151H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-08 63.5 50 60.0
BraA09t41667Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-08 63.5 66 50.0
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-08 63.2 79 44.3
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-08 63.2 75 48.0
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-08 63.2 64 48.4
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-08 63.2 68 47.1
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-08 63.2 75 48.0
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-08 62.8 55 49.1
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-08 62.8 55 49.1
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-08 62.8 55 49.1
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-08 62.8 55 49.1
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-08 62.8 52 51.9
BcaB01g00816 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-08 62.4 71 49.3
C08p23390 Brassica napus HOM05D000313 ORTHO05D015528 2.8e-08 62.4 71 49.3
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-08 62.0 75 45.3
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 3.6e-08 62.0 65 46.2
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-08 61.6 64 50.0
C03p52850 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-08 61.6 53 58.5
BcaC04g20831 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-08 60.8 58 50.0
C09p38710 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-08 60.8 58 50.0
BolC9t56725H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-08 60.8 58 50.0
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 8.0e-08 60.8 75 48.0
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 60.5 76 43.4
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 60.5 72 43.1
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 60.5 72 45.8
BolC6t36836H Brassica oleracea HOM05D000313 ORTHO05D015501 1.0e-07 60.5 67 49.3
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 60.1 52 51.9
BcaC07g38309 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 60.1 72 45.8
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-07 60.1 55 50.9
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-07 60.1 67 46.3
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-07 60.1 52 53.8
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-07 60.1 74 47.3
BcaB05g23567 Brassica carinata HOM05D000313 ORTHO05D019939 1.8e-07 59.7 63 47.6
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-07 59.7 55 50.9
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-07 59.7 55 47.3
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-07 59.7 55 47.3
BcaB06g28052 Brassica carinata HOM05D000313 ORTHO05D019939 2.3e-07 59.3 63 47.6
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-07 59.3 55 47.3
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-07 59.3 72 47.2
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-07 59.3 55 47.3
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-07 59.3 55 47.3
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-07 58.9 75 45.3
C08p36900 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-07 58.9 67 50.7
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-07 58.9 85 44.7
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-07 58.5 55 47.3
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-07 58.5 55 49.1
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-07 58.2 67 46.3
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-07 58.2 55 47.3
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-07 58.2 56 48.2
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-07 58.2 55 47.3
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-07 58.2 55 47.3
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-07 58.2 55 47.3
C08p10540 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-07 58.2 63 46.0
BraA02t06404Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-07 58.2 55 47.3
BcaB06g27070 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-07 57.8 67 47.8
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-07 57.8 52 51.9
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-07 57.8 55 45.5
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-07 57.8 55 49.1
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 6.8e-07 57.8 52 48.1
BcaB01g03545 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-07 57.4 52 50.0
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-07 57.4 75 41.3
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-07 57.4 75 45.3
A05p19140 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-07 57.4 67 41.8
A08p04810 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-07 57.4 67 41.8
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-07 57.4 75 45.3
C09p46350 Brassica napus HOM05D015051 ORTHO05D000065 8.9e-07 57.4 56 51.8
BolC1t02301H Brassica oleracea HOM05D000313 ORTHO05D000065 8.9e-07 57.4 61 47.5
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 8.9e-07 57.4 75 45.3
BraA05t20817Z Brassica rapa HOM05D000313 ORTHO05D000065 8.9e-07 57.4 67 41.8
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 57.0 55 49.1
C06p16350 Brassica napus HOM05D000469 ORTHO05D015501 1.2e-06 57.0 56 57.1
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.0 55 49.1
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 57.0 56 46.4
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-06 56.6 55 49.1
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-06 56.6 55 47.3
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-06 56.6 55 49.1
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.2 55 49.1
A03p42130 Brassica napus HOM05D000469 ORTHO05D015501 2.0e-06 56.2 66 50.0
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.2 57 45.6
A09p62100 Brassica napus HOM05D000469 ORTHO05D015501 2.0e-06 56.2 66 50.0
A10p06270 Brassica napus HOM05D000469 ORTHO05D015501 2.0e-06 56.2 66 50.0
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.2 52 51.9
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-06 56.2 52 51.9
C07p48230 Brassica napus HOM05D000313 ORTHO05D015501 2.0e-06 56.2 66 50.0
C09p02910 Brassica napus HOM05D000469 ORTHO05D015501 2.0e-06 56.2 66 50.0
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-06 55.8 55 45.5
THA.LOC104813725 Tarenaya hassleriana HOM05D000313 ORTHO05D000065 2.6e-06 55.8 68 42.6
C07p34690 Brassica napus HOM05D000313 ORTHO05D015501 3.4e-06 55.5 59 52.5
BolC8t47994H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-06 55.5 55 47.3
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-06 55.1 55 45.5
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-06 55.1 55 47.3
BcaC05g28504 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-06 55.1 69 44.9
BolC5t33306H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-06 55.1 69 44.9
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 4.4e-06 55.1 57 43.9
BcaB03g15252 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-06 54.7 57 45.6
BraA04t16524Z Brassica rapa HOM05D000313 ORTHO05D000065 5.7e-06 54.7 48 52.1
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-06 54.3 55 45.5
C02p45530 Brassica napus HOM05D011859 ORTHO05D016713 7.5e-06 54.3 46 60.9
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-06 54.3 53 49.1
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 7.5e-06 54.3 55 45.5
BcaB05g22616 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-06 53.9 82 35.4
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-06 53.9 61 42.6


User provided reference genes

Program Settings