Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 7.2e-47 190.3 99 100.0
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.7e-43 179.1 108 89.8
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 2.2e-43 178.7 99 92.9
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 5.0e-40 167.5 99 88.9
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 1.1e-39 166.4 102 89.2
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.9e-39 165.6 99 88.9
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.1e-38 162.2 99 86.9
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.4e-37 159.5 99 83.8
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 4.4e-36 154.5 99 82.8
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.5e-36 153.7 92 83.7
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.3e-35 152.9 99 81.8
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 6.3e-35 150.6 92 83.7
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 1.4e-34 149.4 87 86.2
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.4e-34 149.4 90 83.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.8e-34 149.1 90 82.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 3.1e-34 148.3 99 79.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 4.1e-34 147.9 87 83.9
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 4.5e-33 144.4 89 84.3
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 4.5e-33 144.4 89 84.3
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 4.5e-33 144.4 89 84.3
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 1.0e-32 143.3 86 83.7
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.3e-32 142.9 89 83.1
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.7e-32 142.5 90 82.2
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 3.8e-32 141.4 97 80.4
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 3.8e-32 141.4 89 79.8
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 3.8e-32 141.4 85 82.4
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 6.6e-32 140.6 85 81.2
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.6e-32 140.6 85 81.2
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 8.6e-32 140.2 91 78.0
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 80.0
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.1e-31 139.8 90 80.0
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 1.1e-31 139.8 93 75.3
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.1e-31 139.8 89 79.8
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.9e-31 139.0 87 79.3
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.9e-31 139.0 91 76.9
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 2.5e-31 138.7 87 78.2
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 3.3e-31 138.3 81 84.0
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.3e-31 138.3 85 81.2
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.3e-31 138.3 85 81.2
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 3.3e-31 138.3 85 81.2
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 3.3e-31 138.3 85 81.2
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 4.3e-31 137.9 85 82.4
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.3e-31 137.9 80 83.8
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.3e-31 137.9 80 83.8
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 4.3e-31 137.9 89 76.4
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 4.3e-31 137.9 89 77.5
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.6e-31 137.5 92 73.9
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 7.3e-31 137.1 91 76.9
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 7.3e-31 137.1 89 76.4
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 9.5e-31 136.7 80 82.5
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 9.5e-31 136.7 80 82.5
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 9.5e-31 136.7 89 76.4
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 9.5e-31 136.7 91 75.8
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 9.5e-31 136.7 89 76.4
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 1.2e-30 136.3 91 76.9
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.2e-30 136.3 92 72.8
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.2e-30 136.3 89 75.3
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 1.6e-30 136.0 92 76.1
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.6e-30 136.0 87 77.0
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.6e-30 136.0 99 73.7
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.6e-30 136.0 85 78.8
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 2.1e-30 135.6 89 76.4
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 2.1e-30 135.6 80 83.8
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 2.8e-30 135.2 88 75.0
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.8e-30 135.2 87 77.0
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 4.7e-30 134.4 89 74.2
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 4.7e-30 134.4 91 74.7
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 4.7e-30 134.4 85 77.6
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 8.0e-30 133.7 93 76.3
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.0e-29 133.3 91 73.6
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 1.4e-29 132.9 96 71.9
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-29 132.5 89 73.0
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.8e-29 132.5 89 73.0
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.8e-29 132.5 92 71.7
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 2.3e-29 132.1 89 74.2
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 5.2e-29 131.0 92 70.7
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 5.2e-29 131.0 91 72.5
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 8.9e-29 130.2 91 72.5
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 8.9e-29 130.2 91 72.5
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 2.0e-28 129.0 89 73.0
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.6e-28 128.6 87 75.9
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.6e-28 128.6 92 70.7
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 4.4e-28 127.9 79 81.0
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 4.4e-28 127.9 88 73.9
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 5.7e-28 127.5 89 70.8
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 8.3e-27 123.6 92 68.5
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.1e-26 123.2 94 70.2
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 1.4e-26 122.9 91 67.0
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 4.1e-26 121.3 92 67.4
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 1.6e-25 119.4 82 73.2
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 4.6e-25 117.9 87 67.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 4.6e-25 117.9 87 67.8
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 5.9e-25 117.5 72 81.9
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 3.0e-24 115.2 91 64.8
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.5e-23 112.8 93 65.6
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 4.3e-23 111.3 82 68.3
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 9.5e-23 110.2 158 43.7
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.1e-22 109.0 73 74.0
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 3.6e-22 108.2 73 76.7
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 4.7e-22 107.8 89 67.4
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 6.2e-22 107.5 72 73.6
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 2.3e-21 105.5 68 77.9
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 5.2e-21 104.4 67 76.1
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 8.9e-21 103.6 71 74.6
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 3.4e-20 101.7 71 71.8
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.4e-20 101.3 72 72.2
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 7.5e-20 100.5 83 63.9
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 9.8e-20 100.1 68 75.0
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.3e-19 99.8 73 68.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.2e-19 99.0 60 80.0
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 6.4e-19 97.4 80 63.8
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.1e-18 96.7 79 62.0
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 4.1e-18 94.7 68 69.1
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 4.6e-17 91.3 70 67.1
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 2.3e-16 89.0 69 65.2
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.6e-14 82.8 104 51.0
Cc05_g15440 Coffea canephora HOM05D002854 ORTHO05D003051 2.1e-06 55.8 83 42.2
Zm00001eb333130 Zea mays HOM05D002854 ORTHO05D003051 2.1e-06 55.8 90 44.4
CiPaw.10G167200 Carya illinoinensis HOM05D002854 ORTHO05D003051 3.6e-06 55.1 91 41.8
Pp3c5_25080 Physcomitrium patens HOM05D002854 ORTHO05D003051 4.7e-06 54.7 79 40.5
MBI15_g19867_MAGBIO Magnolia biondii HOM05D002854 ORTHO05D003051 8.1e-06 53.9 78 47.4
SalBow3G3879 Salvia bowleyana HOM05D002854 ORTHO05D003051 8.1e-06 53.9 83 42.2


User provided reference genes

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