Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC8t52763H Brassica oleracea HOM05D051089 ORTHO05D041220 8.5e-23 109.4 52 100.0
C08p52340 Brassica napus HOM05D051089 ORTHO05D041220 9.4e-22 105.9 52 98.1
BcaC07g42175 Brassica carinata HOM05D002224 ORTHO05D002446 1.2e-13 79.0 41 92.7
A09p67930 Brassica napus HOM05D002224 ORTHO05D002446 1.2e-13 79.0 41 92.7
C08p52350 Brassica napus HOM05D002224 ORTHO05D002446 1.2e-13 79.0 41 92.7
BolC8t52764H Brassica oleracea HOM05D002224 ORTHO05D002446 1.2e-13 79.0 41 92.7
BraA09t42128Z Brassica rapa HOM05D002224 ORTHO05D002446 3.6e-13 77.4 41 90.2
BcaC07g42194 Brassica carinata HOM05D002224 ORTHO05D002446 8.3e-10 66.2 42 83.3
Sp1g03110 Schrenkiella parvula HOM05D002224 ORTHO05D002446 3.1e-09 64.3 41 75.6
AT1G04300 Arabidopsis thaliana HOM05D002224 ORTHO05D002446 5.4e-09 63.5 41 73.2
BcaC07g36918 Brassica carinata HOM05D002224 ORTHO05D002446 6.5e-07 56.6 43 67.4
A08p37000 Brassica napus HOM05D002224 ORTHO05D002446 6.5e-07 56.6 43 67.4
C08p01010 Brassica napus HOM05D002224 ORTHO05D002446 6.5e-07 56.6 43 67.4
BolC8t46901H Brassica oleracea HOM05D002224 ORTHO05D002446 6.5e-07 56.6 43 67.4
BraA08t35600Z Brassica rapa HOM05D002224 ORTHO05D002446 6.5e-07 56.6 43 67.4
Sp2g08380 Schrenkiella parvula HOM05D002224 ORTHO05D002446 3.2e-06 54.3 41 63.4
Aa31LG5G3630 Aethionema arabicum HOM05D002224 ORTHO05D002446 9.5e-06 52.8 41 61.0


User provided reference genes

Program Settings