Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t40412H Brassica oleracea HOM05D000209 ORTHO05D039677 1.3e-41 172.6 85 100.0
C06p53990 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-35 151.8 77 96.1
A07p45150 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-31 138.3 79 89.9
BraA07t32018Z Brassica rapa HOM05D000209 ORTHO05D000129 8.1e-31 136.7 78 89.7
BcaB02g07277 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-22 107.8 80 73.8
BcaC08g47488 Brassica carinata HOM05D042178 ORTHO05D000129 9.3e-19 96.7 78 65.4
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.8e-15 85.1 69 60.9
C06p45010 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-15 85.1 77 64.9
C06p42890 Brassica napus HOM05D000209 ORTHO05D000129 4.8e-15 84.3 75 65.3
BcaC08g46165 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-14 82.0 73 65.8
CARHR162370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.1e-14 81.6 69 56.5
Carub.0005s2337 Capsella rubella HOM05D000209 ORTHO05D000129 5.3e-14 80.9 69 56.5
Carub.0008s1500 Capsella rubella HOM05D000209 ORTHO05D000129 1.7e-12 75.9 68 55.9
AL1G40170 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-12 75.1 67 55.2
BcaC06g36637 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-12 75.1 72 63.9
BolC7t40602H Brassica oleracea HOM05D000209 ORTHO05D000129 2.9e-12 75.1 72 63.9
Thhalv10009753m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.4e-11 72.8 71 52.1
AL1G40180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-11 72.0 67 55.2
BolC6t39559H Brassica oleracea HOM05D000209 ORTHO05D000129 4.2e-11 71.2 62 67.7
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 4.2e-11 71.2 68 54.4
AL1G39630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-11 70.9 68 51.5
BcaC08g46814 Brassica carinata HOM05D000209 ORTHO05D039677 1.2e-10 69.7 61 59.0
AL1G46220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-10 68.9 77 42.9
Thhalv10009944m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.1e-10 68.9 71 52.1
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.6e-10 67.8 79 45.6
AT1G32140 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-10 67.8 77 44.2
A05p15820 Brassica napus HOM05D000209 ORTHO05D014424 7.9e-10 67.0 70 48.6
BraA05t20495Z Brassica rapa HOM05D000209 ORTHO05D000129 7.9e-10 67.0 70 48.6
AL1G40160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.0e-09 66.6 66 51.5
BolC4t23651H Brassica oleracea HOM05D000209 ORTHO05D014424 1.4e-09 66.2 70 50.0
CARHR088860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-09 66.2 69 49.3
CARHR025790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.8e-09 65.9 64 46.9
CARHR223800 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.8e-09 65.9 68 47.1
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-09 65.5 78 47.4
AL7G39300 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-09 65.1 69 53.6
BcaC04g21314 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-09 65.1 79 45.6
C09p33220 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-09 65.1 79 45.6
BolC9t56160H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-09 65.1 79 45.6
BcaC06g34076 Brassica carinata HOM05D000209 ORTHO05D000129 5.1e-09 64.3 68 47.1
C07p33050 Brassica napus HOM05D000209 ORTHO05D000129 5.1e-09 64.3 68 47.1
CARHR158520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.1e-09 64.3 71 52.1
AL3G33370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-09 63.9 69 50.7
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.7e-09 63.9 67 50.7
Carub.0001s3046 Capsella rubella HOM05D000209 ORTHO05D000129 6.7e-09 63.9 77 40.3
BcaC01g00571 Brassica carinata HOM05D000209 ORTHO05D000129 8.8e-09 63.5 70 47.1
BolC3t20418H Brassica oleracea HOM05D000209 ORTHO05D014056 8.8e-09 63.5 70 47.1
AT1G54550 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-08 63.2 68 54.4
BraA06t27255Z Brassica rapa HOM05D000209 ORTHO05D000129 1.1e-08 63.2 68 45.6
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-08 62.8 68 47.1
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-08 62.8 68 47.1
BolC1t05025H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-08 62.8 68 47.1
BraA09t38187Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-08 62.8 67 49.3
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.5e-08 62.8 70 48.6
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-08 62.4 67 50.7
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-08 62.4 63 57.1
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-08 62.4 63 57.1
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-08 62.4 63 57.1
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-08 62.4 63 57.1
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-08 62.4 63 57.1
BraA06t27254Z Brassica rapa HOM05D000209 ORTHO05D000129 1.9e-08 62.4 68 45.6
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-08 62.4 74 47.3
BcaC06g31247 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-08 62.0 56 48.2
BcaC06g34071 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-08 62.0 56 48.2
BolC7t43814H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-08 62.0 56 48.2
Carub.0005s1584 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-08 62.0 68 47.1
Thhalv10027178m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.5e-08 62.0 71 47.9
A08p13990 Brassica napus HOM05D000209 ORTHO05D014056 3.3e-08 61.6 69 46.4
C03p81470 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-08 61.6 69 46.4
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 3.3e-08 61.6 69 46.4
BcaC03g15722 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-08 61.2 68 51.5
C02p34380 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-08 61.2 68 51.5
BolC2t09468H Brassica oleracea HOM05D000209 ORTHO05D000129 4.3e-08 61.2 68 51.5
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.3e-08 61.2 90 41.1
Thhalv10002786m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.3e-08 61.2 67 52.2
AT4G05080 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.7e-08 60.8 69 44.9
A03p41930 Brassica napus HOM05D000209 ORTHO05D000129 5.7e-08 60.8 68 45.6
A06p43770 Brassica napus HOM05D000209 ORTHO05D000129 5.7e-08 60.8 68 44.1
BolC3t17420H Brassica oleracea HOM05D000209 ORTHO05D000129 5.7e-08 60.8 68 45.6
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.4e-08 60.5 85 42.4
BcaC02g11047 Brassica carinata HOM05D000209 ORTHO05D000129 7.4e-08 60.5 69 47.8
A06p43760 Brassica napus HOM05D000209 ORTHO05D000129 7.4e-08 60.5 71 42.3
AT5G60560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.7e-08 60.1 68 50.0
BcaB04g19131 Brassica carinata HOM05D000209 ORTHO05D000129 9.7e-08 60.1 68 45.6
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 9.7e-08 60.1 68 45.6
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-07 59.7 70 47.1
AL3G51580 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-07 59.7 70 45.7
AL7G17020 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-07 59.7 63 50.8
BcaC01g03537 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-07 59.7 68 44.1
Carub.0001s2537 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-07 59.7 55 56.4
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-07 59.7 70 47.1
AL3G24770 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-07 59.3 57 50.9
C03p51320 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-07 59.3 64 45.3
CARHR095400 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-07 59.3 62 46.8
AL3G25970 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.2e-07 58.9 72 47.2
AT1G59680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.2e-07 58.9 70 50.0
AT3G19880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.2e-07 58.9 69 44.9
BolC7t43816H Brassica oleracea HOM05D000209 ORTHO05D000129 2.8e-07 58.5 56 46.4
BraA03t13347Z Brassica rapa HOM05D000209 ORTHO05D000129 2.8e-07 58.5 68 44.1
Carub.0003s1995 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-07 58.5 69 46.4
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.7e-07 58.2 70 44.3
AT3G49520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.7e-07 58.2 68 45.6
C04p21180 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-07 58.2 70 42.9
BraA01t04016Z Brassica rapa HOM05D000209 ORTHO05D014424 3.7e-07 58.2 65 49.2
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 3.7e-07 58.2 68 47.1
CARHR095410 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.7e-07 58.2 69 42.0
Sp3g11150 Schrenkiella parvula HOM05D000209 ORTHO05D014424 4.8e-07 57.8 71 46.5
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-07 57.4 69 40.6
Carub.0003s2322 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-07 57.4 68 41.2
CARHR262270 Cardamine hirsuta HOM05D000209 ORTHO05D014424 6.3e-07 57.4 70 42.9
AT3G13830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.2e-07 57.0 65 49.2
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.2e-07 57.0 68 44.1
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.2e-07 57.0 68 42.6
AT1G66490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 56.6 68 45.6
AT3G19890 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 56.6 69 43.5
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 56.6 67 44.8
BcaB07g32803 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 56.2 68 47.1
BcaC01g03538 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 56.2 68 42.6
C03p51330 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-06 56.2 68 42.6
BolC5t33203H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 56.2 69 42.0
Carub.0001s2538 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-06 56.2 48 64.6
Carub.0003s2032 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-06 56.2 68 45.6
CARHR088150 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-06 56.2 74 40.5
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.8e-06 55.8 70 42.9
BcaB04g19128 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-06 55.8 64 43.8
Thhalv10022402m.g Eutrema salsugineum HOM05D000209 ORTHO05D014424 1.8e-06 55.8 68 42.6
CARHR088600 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.4e-06 55.5 63 44.4
AL3G25680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-06 55.1 71 38.0
BcaB04g20976 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 55.1 55 47.3
C04p65350 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-06 55.1 72 40.3
CARHR060020 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.1e-06 55.1 66 43.9
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.1e-06 55.1 73 42.5
AL3G25690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-06 54.7 70 41.4
A04p27850 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-06 54.7 74 40.5
BraA04t18277Z Brassica rapa HOM05D000209 ORTHO05D000129 4.1e-06 54.7 74 40.5
AT1G11810 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.3e-06 54.3 69 44.9
BcaC09g48331 Brassica carinata HOM05D000209 ORTHO05D000129 6.9e-06 53.9 67 44.8
C01p51320 Brassica napus HOM05D000209 ORTHO05D000129 6.9e-06 53.9 67 44.8
BolC1t05083H Brassica oleracea HOM05D000209 ORTHO05D000129 6.9e-06 53.9 67 44.8
Thhalv10023084m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.9e-06 53.9 67 40.3
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 9.1e-06 53.5 67 44.8
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 9.1e-06 53.5 67 44.8
BolC9t56159H Brassica oleracea HOM05D000209 ORTHO05D014424 9.1e-06 53.5 55 50.9
Carub.0003s1334 Capsella rubella HOM05D000209 ORTHO05D000129 9.1e-06 53.5 73 43.8
Carub.0003s1337 Capsella rubella HOM05D000209 ORTHO05D000129 9.1e-06 53.5 64 42.2
Carub.0003s1977 Capsella rubella HOM05D000209 ORTHO05D000129 9.1e-06 53.5 68 41.2


User provided reference genes

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