Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.1e-80 302.4 159 100.0
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 7.0e-76 287.3 159 96.2
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 1.3e-74 283.1 159 93.7
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.2e-72 276.6 159 90.6
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.0e-71 273.5 156 94.2
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 1.1e-68 263.5 160 88.8
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.1e-68 263.5 155 89.7
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 5.0e-66 254.6 159 86.2
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 7.5e-62 240.7 161 82.6
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.0e-58 230.3 161 77.6
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 3.8e-58 228.4 134 94.0
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 7.8e-51 204.1 160 68.8
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 3.3e-49 198.7 164 68.9
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 2.1e-48 196.1 162 68.5
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 2.8e-48 195.7 160 70.0
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.8e-48 195.7 162 68.5
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.8e-48 195.7 162 68.5
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.8e-48 195.7 162 68.5
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.8e-48 195.7 160 66.9
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 4.7e-48 194.9 159 65.4
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 4.7e-48 194.9 159 65.4
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.7e-48 194.9 162 66.7
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 6.2e-48 194.5 162 68.5
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.4e-47 193.4 158 67.7
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 4.0e-47 191.8 159 64.8
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 5.2e-47 191.4 166 66.3
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 5.2e-47 191.4 160 66.2
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 6.8e-47 191.0 129 76.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 6.8e-47 191.0 163 69.9
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 8.9e-47 190.7 126 75.4
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 1.2e-46 190.3 162 67.9
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.0e-46 189.5 161 64.6
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 3.4e-46 188.7 171 63.7
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 4.4e-46 188.3 167 66.5
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 5.8e-46 188.0 160 66.9
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 5.8e-46 188.0 169 65.7
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 7.5e-46 187.6 161 65.2
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 9.8e-46 187.2 170 63.5
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 1.3e-45 186.8 170 63.5
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 2.9e-45 185.7 166 66.3
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 3.7e-45 185.3 161 64.0
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 6.4e-45 184.5 94 89.4
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 8.3e-45 184.1 167 65.9
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 174 62.1
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 94 89.4
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.4e-44 183.3 124 72.6
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.9e-44 183.0 172 62.8
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 1.9e-44 183.0 103 82.5
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.9e-44 183.0 164 64.0
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.9e-44 183.0 92 90.2
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.9e-44 183.0 157 63.7
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 3.2e-44 182.2 160 65.6
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 4.1e-44 181.8 163 62.6
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 4.1e-44 181.8 163 63.2
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 5.4e-44 181.4 101 85.1
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 5.4e-44 181.4 164 65.9
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.2e-43 180.3 151 66.9
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.2e-43 180.3 134 69.4
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 2.0e-43 179.5 154 65.6
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 2.0e-43 179.5 159 65.4
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 4.6e-43 178.3 172 61.0
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 6.0e-43 177.9 154 67.5
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 1.0e-42 177.2 158 61.4
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.3e-42 176.8 172 61.0
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.3e-42 176.8 167 64.1
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 1.7e-42 176.4 159 60.4
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 2.3e-42 176.0 163 60.1
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 8.6e-42 174.1 159 64.8
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 8.6e-42 174.1 169 58.0
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.1e-41 173.7 91 87.9
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.9e-41 172.9 165 58.8
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 4.3e-41 171.8 162 61.7
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 4.3e-41 171.8 162 61.7
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 7.3e-41 171.0 107 73.8
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 7.3e-41 171.0 153 62.1
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 9.5e-41 170.6 111 76.6
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 9.5e-41 170.6 156 67.9
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 9.5e-41 170.6 156 61.5
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 1.2e-40 170.2 165 60.0
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 1.6e-40 169.9 166 62.7
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.1e-39 167.2 86 87.2
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.4e-39 166.8 179 57.0
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 5.2e-39 164.9 164 59.1
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.2e-38 163.7 86 87.2
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 2.0e-38 162.9 166 58.4
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 4.4e-38 161.8 80 87.5
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 7.5e-38 161.0 83 89.2
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 7.5e-38 161.0 81 92.6
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 4.9e-37 158.3 186 54.8
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 8.3e-37 157.5 147 60.5
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 3.2e-36 155.6 187 52.4
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 5.4e-36 154.8 159 57.2
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.1e-35 152.9 81 85.2
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 7.8e-35 151.0 82 82.9
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 1.3e-34 150.2 87 75.9
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 8.6e-34 147.5 164 56.1
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 8.6e-34 147.5 75 88.0
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 7.3e-33 144.4 77 87.0
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.8e-31 139.8 135 54.8
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 3.4e-30 135.6 68 88.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 8.4e-29 131.0 88 70.5
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 8.9e-23 110.9 87 67.8
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.4e-20 103.6 89 66.3


User provided reference genes

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