Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.1e-89 332.4 174 100.0
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 4.5e-68 261.5 150 88.0
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 7.4e-55 217.6 216 57.9
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-50 202.6 218 54.6
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 2.5e-50 202.6 218 54.6
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-48 195.7 166 63.3
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 5.7e-47 191.4 222 53.6
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 2.8e-46 189.1 219 53.4
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 2.8e-46 189.1 219 53.4
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 6.3e-46 188.0 208 51.4
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 5.3e-45 184.9 220 51.4
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-44 183.7 210 51.4
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 4.5e-44 181.8 211 52.6
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-43 180.6 210 51.4
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.5e-42 176.0 212 51.9
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-41 172.9 212 50.0
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-41 172.9 212 50.0
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.4e-40 170.2 208 48.1
C06p46620 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-40 170.2 118 76.3
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 2.8e-38 162.5 220 45.9
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 6.3e-38 161.4 174 56.3
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 6.3e-38 161.4 174 56.3
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 6.3e-38 161.4 174 56.3
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 2.4e-37 159.5 222 46.4
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 7.0e-37 157.9 188 50.0
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 1.3e-35 153.7 203 45.8
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-32 144.1 213 45.5
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 1.0e-32 144.1 213 45.5
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-32 143.7 205 45.4
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 3.0e-32 142.5 222 45.5
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 8.8e-32 141.0 220 43.2
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 3.4e-31 139.0 215 45.6
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.3e-30 137.1 209 45.5
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-27 125.6 214 40.7
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 3.8e-27 125.6 214 40.7
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-27 125.6 214 40.7
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 6.5e-27 124.8 201 42.3
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 8.6e-27 124.4 213 40.8
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-26 124.0 198 42.9
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-26 123.6 213 39.9
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-25 119.8 216 39.4
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 3.6e-25 119.0 204 38.7
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.7e-25 118.6 222 40.1
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.0e-24 117.5 212 39.6
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-24 116.3 215 39.1
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-24 116.3 212 39.2
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-24 116.3 215 39.1
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-24 116.3 212 39.2
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-24 115.9 214 40.2
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-24 115.9 214 40.2
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 3.0e-24 115.9 214 40.2
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 6.8e-24 114.8 212 39.2
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 8.9e-24 114.4 178 45.5
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 8.9e-24 114.4 216 38.9
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 7.5e-23 111.3 215 38.6
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 7.5e-23 111.3 215 38.6
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-22 110.2 189 43.9
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 3.7e-22 109.0 214 38.3
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 3.7e-22 109.0 196 37.8
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 3.7e-22 109.0 196 37.8
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 4.9e-22 108.6 214 38.8
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 4.9e-22 108.6 214 38.8
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 5.4e-21 105.1 207 38.6
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-20 104.0 214 37.9
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.2e-20 104.0 214 37.9
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 5.9e-20 101.7 204 37.3
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 3.8e-19 99.0 207 37.7
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 3.8e-19 99.0 207 37.7
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 8.6e-19 97.8 204 37.3
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-18 96.7 71 66.2
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 9.5e-18 94.4 166 37.3
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.1e-17 93.2 196 32.1
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-16 89.7 181 40.9
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 4.0e-16 89.0 81 59.3
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 4.0e-16 89.0 81 59.3
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-16 88.6 64 65.6
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 5.2e-16 88.6 64 65.6
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 5.2e-16 88.6 64 65.6
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-15 86.3 180 38.9
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 2.6e-15 86.3 182 36.8
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 6.0e-12 75.1 98 45.9
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 6.0e-12 75.1 98 45.9
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 6.0e-12 75.1 98 45.9
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 9.5e-10 67.8 165 33.9
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.0e-08 62.4 93 46.2
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 8.9e-08 61.2 205 26.8
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 8.9e-08 61.2 210 32.4
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 8.9e-08 61.2 213 30.5
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-07 59.7 93 45.2
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-07 59.7 76 44.7
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-07 59.7 204 31.9
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.4e-07 59.3 143 29.4
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-07 59.3 76 47.4
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-07 58.5 76 43.4
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 5.8e-07 58.5 76 43.4
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.3e-06 57.4 143 31.5
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.7e-06 57.0 85 40.0
Oeu018758.1 Olea europaea HOM05D000535 ORTHO05D000427 4.9e-06 55.5 109 33.9


User provided reference genes

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