Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-124 449.9 223 100.0
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-90 337.0 224 78.1
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-90 336.7 222 78.4
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 1.4e-90 336.7 222 78.4
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-89 332.4 225 77.8
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-89 332.4 225 77.8
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-88 329.3 224 76.3
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 5.5e-87 324.7 224 77.2
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 7.2e-87 324.3 212 80.7
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-85 319.3 224 75.4
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 6.8e-85 317.8 222 76.6
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-84 316.2 222 76.1
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-84 316.2 222 76.1
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 2.2e-83 312.8 224 75.0
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 3.5e-73 278.9 225 68.4
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 6.6e-72 274.6 221 68.3
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.2e-70 270.4 225 68.4
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 6.1e-70 268.1 222 68.9
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.8e-69 266.5 199 69.3
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-69 266.2 222 68.5
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-69 266.2 222 68.5
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 4.9e-67 258.5 203 69.0
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 9.2e-66 254.2 223 63.2
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.2e-65 253.8 206 67.0
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-59 233.0 223 59.6
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 3.9e-56 222.2 225 56.4
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 6.6e-56 221.5 226 56.2
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-55 218.8 226 56.2
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 7.3e-55 218.0 222 55.4
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 3.6e-54 215.7 224 54.9
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 3.6e-54 215.7 224 54.9
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 4.7e-54 215.3 225 54.2
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 4.7e-54 215.3 225 54.2
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-53 213.8 225 55.1
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.8e-53 213.4 223 57.0
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-53 211.8 224 54.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-53 211.8 224 54.5
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 8.9e-53 211.1 225 54.7
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.2e-52 210.7 226 57.5
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-51 206.8 217 53.5
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-51 206.8 217 53.5
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 2.2e-51 206.5 217 53.5
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 6.4e-51 204.9 229 56.8
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 5.4e-50 201.8 217 53.0
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 5.4e-50 201.8 217 53.0
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 3.5e-49 199.1 104 94.2
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.4e-45 187.2 219 48.4
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-45 186.4 224 50.4
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-45 186.4 192 54.2
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 4.0e-45 185.7 208 51.4
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-44 183.7 222 53.6
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-44 183.7 222 53.6
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.5e-44 183.7 222 53.6
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 2.0e-44 183.3 221 52.9
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-44 182.6 224 50.4
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-43 180.3 222 53.2
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-43 179.9 226 51.8
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.2e-43 179.9 226 51.8
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.4e-42 176.4 224 50.4
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 3.2e-42 176.0 168 56.5
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-40 170.2 221 50.7
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-39 165.6 220 50.5
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-38 163.7 218 50.0
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-38 163.7 218 50.0
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-38 163.7 218 50.0
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 2.4e-37 159.8 229 49.3
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 3.1e-37 159.5 218 49.5
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-37 159.5 218 49.5
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 5.4e-34 148.7 204 52.0
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 5.4e-34 148.7 204 52.0
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 5.4e-34 148.7 204 52.0
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.7e-32 143.7 162 53.7
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 9.6e-31 137.9 230 41.7
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 3.6e-30 136.0 221 47.1
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 3.6e-30 136.0 230 41.3
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-29 133.3 230 41.3
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 5.3e-29 132.1 230 40.4
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 9.0e-29 131.3 230 40.4
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-28 130.2 90 75.6
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-28 130.2 90 75.6
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 7.6e-28 128.3 240 39.2
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 4.2e-26 122.5 228 38.6
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 7.1e-26 121.7 221 43.9
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.3e-24 117.5 230 37.8
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.3e-24 117.5 229 38.9
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 8.7e-24 114.8 129 53.5
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-23 113.6 129 53.5
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 2.8e-22 109.8 141 47.5
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 2.8e-22 109.8 141 47.5
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 2.8e-22 109.8 141 47.5
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 3.6e-22 109.4 229 36.7
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 3.6e-22 109.4 229 36.7
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 8.1e-22 108.2 229 36.7
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-21 106.7 230 37.8
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 2.4e-21 106.7 230 37.8
C06p46620 Brassica napus HOM05D007344 ORTHO05D009010 3.4e-20 102.8 158 41.8
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-20 101.7 69 73.9
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 7.6e-20 101.7 161 42.2
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 9.9e-20 101.3 64 78.1
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 9.9e-20 101.3 64 78.1
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.7e-19 100.5 207 35.7
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.7e-19 100.5 227 36.6
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 2.7e-17 93.2 129 48.8
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.3e-16 90.9 239 32.6
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 5.1e-16 89.0 201 36.3
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 6.2e-14 82.0 209 34.4
BcaB03g15050 Brassica carinata HOM05D000535 ORTHO05D000427 4.0e-13 79.3 229 30.1
BolC6t39791H Brassica oleracea HOM05D000535 ORTHO05D009010 1.5e-12 77.4 212 30.7
C06p47530 Brassica napus HOM05D000535 ORTHO05D009010 3.4e-12 76.3 211 30.3
THA.LOC104812190 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 3.4e-12 76.3 165 34.5
BcaC08g46756 Brassica carinata HOM05D000535 ORTHO05D009010 7.6e-12 75.1 211 29.9
Thhalv10019129m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 7.6e-12 75.1 227 30.4
A07p39300 Brassica napus HOM05D000535 ORTHO05D009010 2.9e-11 73.2 211 29.9
BraA07t31479Z Brassica rapa HOM05D000535 ORTHO05D009010 2.9e-11 73.2 211 29.9
AL2G33090 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 4.9e-11 72.4 230 28.7
AT1G73325 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 1.1e-10 71.2 168 32.7
CARHR066380 Cardamine hirsuta HOM05D000535 ORTHO05D000427 1.9e-10 70.5 230 29.6
Sp5g28260 Schrenkiella parvula HOM05D000535 ORTHO05D009010 2.7e-09 66.6 230 28.7
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 3.5e-09 66.2 199 32.2
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.8e-08 63.9 227 27.3
Dinv10714 Davidia involucrata HOM05D000535 ORTHO05D000427 6.7e-08 62.0 137 31.4
AUR62005776 Chenopodium quinoa HOM05D000535 ORTHO05D012047 1.1e-07 61.2 172 27.9
THA.LOC104812189 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 4.3e-07 59.3 173 29.5
AUR62028780 Chenopodium quinoa HOM05D000535 ORTHO05D012047 1.3e-06 57.8 164 26.2
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 1.3e-06 57.8 156 34.0
Ah.03g135120 Amaranthus hybridus HOM05D000535 ORTHO05D000427 2.8e-06 56.6 154 30.5
Medtr6g059760 Medicago truncatula HOM05D000535 ORTHO05D000427 2.8e-06 56.6 147 35.4
Psat0s2953g0120 Pisum sativum HOM05D000535 ORTHO05D000427 2.8e-06 56.6 160 33.1
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 3.7e-06 56.2 174 32.8
EL10Ac6g13198 Beta vulgaris HOM05D000535 ORTHO05D012047 6.3e-06 55.5 142 27.5
Lalb_Chr01g0008701 Lupinus albus HOM05D000535 ORTHO05D000427 8.2e-06 55.1 171 30.4


User provided reference genes

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