Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 5.7e-92 340.9 171 100.0
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 7.2e-79 297.4 184 86.4
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-76 289.3 209 75.6
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-76 289.3 209 75.6
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-72 276.2 213 73.2
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 9.5e-71 270.4 174 82.2
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-66 256.5 176 80.1
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 3.4e-44 182.2 226 52.2
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-43 180.3 226 51.8
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-43 180.3 226 51.8
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-43 179.9 227 50.2
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-43 179.9 227 50.2
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 4.9e-43 178.3 220 51.8
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-42 177.2 220 51.4
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.9e-42 176.4 228 49.1
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-41 172.6 221 50.7
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-41 172.6 221 50.7
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-40 170.2 220 50.9
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-40 170.2 220 50.5
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-40 169.5 221 50.7
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-39 166.4 106 79.2
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 2.5e-39 166.0 229 45.9
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 3.3e-39 165.6 225 47.1
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.1e-37 160.6 228 45.6
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 4.0e-37 158.7 179 53.6
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 4.0e-37 158.7 223 47.5
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 7.3e-31 137.9 216 43.5
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 6.9e-29 131.3 227 41.9
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 9.0e-29 131.0 213 41.3
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-27 125.6 197 42.1
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 3.8e-27 125.6 229 38.9
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 5.4e-26 121.7 225 37.3
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-25 120.2 216 37.0
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 2.1e-25 119.8 174 45.4
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 2.1e-25 119.8 174 45.4
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 2.1e-25 119.8 174 45.4
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-25 119.4 215 36.7
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 2.7e-25 119.4 215 36.7
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-25 119.0 216 37.0
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-25 118.2 216 37.0
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 5.1e-24 115.2 212 36.8
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 5.1e-24 115.2 212 36.8
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 6.7e-24 114.8 225 36.4
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 6.7e-24 114.8 225 36.4
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 8.7e-24 114.4 229 35.8
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 8.7e-24 114.4 218 38.1
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.5e-23 112.8 178 45.5
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-22 110.5 227 36.1
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-22 110.5 227 36.1
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-22 110.2 105 57.1
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.8e-22 109.4 226 37.6
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 1.2e-20 104.0 212 35.4
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 4.9e-19 98.6 212 34.4
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 4.9e-19 98.6 212 34.4
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 4.9e-19 98.6 105 43.8
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.4e-18 97.1 110 52.7
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 2.5e-18 96.3 222 35.6
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-18 96.3 222 35.6
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 2.5e-18 96.3 222 35.6
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 3.2e-18 95.9 221 38.5
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 3.2e-18 95.9 221 38.5
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 4.2e-18 95.5 216 35.2
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-18 95.5 216 35.2
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 4.2e-18 95.5 216 35.2
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 7.1e-18 94.7 186 36.0
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 3.5e-17 92.4 222 36.0
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-17 91.7 216 34.7
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 6.0e-17 91.7 216 34.7
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.0e-16 90.9 213 35.7
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 3.0e-16 89.4 214 36.4
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-15 87.0 226 33.2
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-15 86.7 227 32.6
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-14 84.0 64 75.0
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-14 84.0 64 75.0
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 6.2e-14 81.6 148 39.9
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-14 81.3 217 34.6
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 5.8e-12 75.1 146 35.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-12 75.1 122 37.7
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-12 74.7 122 37.7
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 7.6e-12 74.7 122 37.7
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 7.6e-12 74.7 122 37.7
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.7e-11 73.6 124 37.9
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 2.2e-11 73.2 122 36.9
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.4e-10 70.5 122 37.7
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.5e-07 60.5 176 29.0
EL10Ac6g13199 Beta vulgaris HOM05D000535 ORTHO05D000427 1.9e-07 60.1 108 34.3
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 3.3e-07 59.3 107 38.3
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 9.7e-07 57.8 108 36.1
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.2e-06 56.6 127 34.6
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 8.2e-06 54.7 110 33.6


User provided reference genes

Program Settings