Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 5.9e-86 320.9 166 100.0
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 5.3e-50 201.4 106 98.1
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 6.9e-50 201.1 106 98.1
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.5e-49 199.9 106 97.2
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.5e-46 188.7 106 93.4
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.5e-46 188.7 106 93.4
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 6.6e-45 184.5 106 89.6
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 3.4e-41 172.2 106 87.7
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 7.6e-41 171.0 106 87.7
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.7e-40 169.9 106 86.8
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.7e-40 169.9 106 86.8
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.7e-40 169.9 106 86.8
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 6.4e-40 167.9 106 85.8
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 3.2e-39 165.6 105 84.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 3.2e-39 165.6 106 84.9
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.7e-38 162.5 106 83.0
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 6.9e-34 147.9 101 80.2
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 3.2e-31 139.0 106 71.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.5e-31 138.3 107 74.8
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 1.6e-30 136.7 104 69.2
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.3e-29 133.7 104 71.2
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.3e-29 132.9 104 69.2
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 6.7e-29 131.3 104 70.2
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 4.3e-28 128.6 105 66.7
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 4.3e-28 128.6 105 66.7
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 4.3e-28 128.6 105 66.7
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.6e-27 126.7 108 63.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 4.8e-27 125.2 104 65.4
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.8e-27 125.2 100 67.0
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 8.2e-27 124.4 104 65.4
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.4e-26 123.6 105 68.6
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 2.4e-26 122.9 105 63.8
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.4e-26 122.9 99 67.7
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.1e-26 122.5 102 64.7
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 4.0e-26 122.1 104 63.5
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 5.3e-26 121.7 104 65.4
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 5.3e-26 121.7 98 68.4
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 6.9e-26 121.3 104 63.5
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 6.9e-26 121.3 104 62.5
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.2e-25 120.6 102 65.7
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.2e-25 120.6 105 63.8
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.6e-25 119.4 104 63.5
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 2.6e-25 119.4 105 67.6
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 3.4e-25 119.0 104 63.5
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 3.4e-25 119.0 104 60.6
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 4.5e-25 118.6 100 64.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.0e-24 117.5 101 66.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.0e-24 117.5 103 65.0
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.3e-24 117.1 98 67.3
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.7e-24 116.7 104 61.5
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 2.9e-24 115.9 100 63.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.9e-24 115.9 100 65.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.8e-24 115.5 104 62.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 5.0e-24 115.2 100 63.0
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 5.0e-24 115.2 99 63.6
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 5.0e-24 115.2 104 61.5
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 6.5e-24 114.8 100 62.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 8.4e-24 114.4 100 63.0
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 4.2e-23 112.1 100 61.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 5.5e-23 111.7 104 62.5
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 7.1e-23 111.3 106 61.3
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 7.1e-23 111.3 101 60.4
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 7.1e-23 111.3 100 63.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 9.3e-23 110.9 107 58.9
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 9.3e-23 110.9 104 59.6
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.2e-22 110.5 104 60.6
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.2e-22 110.5 104 60.6
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 1.2e-22 110.5 105 61.9
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.2e-22 110.5 104 60.6
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.6e-22 110.2 107 58.9
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.6e-22 110.2 103 60.2
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-22 109.8 104 58.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.1e-22 109.8 106 56.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 4.6e-22 108.6 102 62.7
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 6.1e-22 108.2 105 59.0
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 7.9e-22 107.8 103 59.2
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.0e-21 107.5 105 59.0
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.3e-21 107.1 101 63.4
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.3e-21 106.3 106 54.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 3.0e-21 105.9 103 61.2
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 3.9e-21 105.5 104 59.6
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.5e-20 103.6 105 61.0
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.5e-20 102.8 104 55.8
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 4.3e-20 102.1 106 54.7
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 4.3e-20 102.1 94 62.8
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 9.7e-20 100.9 104 54.8
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.6e-19 100.1 92 59.8
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 2.8e-19 99.4 100 57.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 4.8e-19 98.6 100 58.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 4.8e-19 98.6 106 53.8
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.4e-18 97.1 85 68.2
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 3.1e-18 95.9 95 57.9
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 3.2e-15 85.9 107 51.4
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 6.1e-14 81.6 87 55.2
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 1.0e-13 80.9 95 52.6
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 9.7e-12 74.3 88 52.3
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 2.2e-11 73.2 74 56.8
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 5.3e-10 68.6 66 60.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.6e-09 66.2 98 46.9


User provided reference genes

Program Settings