Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.1e-147 526.6 261 100.0
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.1e-147 526.6 261 100.0
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.0e-145 520.0 257 100.0
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.0e-145 520.0 257 100.0
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.0e-145 520.0 257 100.0
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 5.8e-144 514.2 257 98.8
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 8.3e-143 510.4 257 98.1
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 8.3e-143 510.4 257 98.1
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.3e-140 503.1 257 96.9
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.3e-140 503.1 257 96.9
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 3.0e-140 501.9 257 96.9
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.2e-138 496.5 257 95.3
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 6.4e-135 484.2 257 92.6
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 9.5e-131 470.3 257 87.5
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 3.4e-128 461.8 257 87.5
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 5.8e-128 461.1 257 86.4
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 3.2e-126 455.3 257 84.8
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 3.2e-126 455.3 257 84.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 3.5e-125 451.8 257 84.4
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 83.3
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.7e-124 449.5 256 84.8
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 1.7e-124 449.5 257 84.0
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 1.7e-124 449.5 256 83.2
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 3.0e-124 448.7 254 86.2
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 5.1e-124 448.0 257 83.3
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 6.6e-124 447.6 257 84.8
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 8.6e-124 447.2 257 83.3
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.9e-123 446.0 259 81.9
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.6e-122 443.0 256 84.8
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.6e-122 443.0 254 85.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.1e-122 442.6 256 83.2
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 2.8e-122 442.2 257 82.9
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 3.6e-122 441.8 256 84.4
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 4.7e-122 441.4 258 83.7
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 6.2e-122 441.0 258 84.9
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 6.2e-122 441.0 258 84.9
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.1e-121 440.3 257 81.7
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.1e-121 440.3 256 82.8
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 84.0
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 82.5
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.4e-121 439.1 256 81.6
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.4e-121 439.1 256 81.6
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.0e-121 438.3 255 84.7
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 6.8e-121 437.6 257 82.5
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 8.9e-121 437.2 257 81.3
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.2e-120 436.8 257 82.9
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 82.9
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 82.9
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 82.9
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 84.0
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 81.7
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 2.0e-120 436.0 254 81.9
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 82.9
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 80.5
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 2.6e-120 435.6 257 80.2
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 3.4e-120 435.3 265 81.1
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 3.4e-120 435.3 260 80.4
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 7.6e-120 434.1 257 83.3
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 9.9e-120 433.7 255 82.7
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.3e-119 433.3 302 71.9
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.5
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 80.5
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 4.9e-119 431.4 257 80.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 81.3
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.4e-118 429.9 257 81.3
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.9e-118 429.5 257 82.1
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.9e-118 429.5 258 81.0
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 3.2e-118 428.7 257 79.8
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.2e-117 426.8 257 80.9
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.1e-117 426.0 271 77.1
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 3.5e-117 425.2 257 79.0
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 7.8e-117 424.1 257 79.8
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 7.8e-117 424.1 257 79.8
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 7.8e-117 424.1 257 79.0
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.0e-116 423.7 271 76.4
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.0e-116 423.7 258 79.1
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.7e-116 422.9 258 78.3
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.3e-116 422.5 257 78.6
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 2.3e-116 422.5 257 80.9
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.9e-116 421.8 257 78.6
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 4.3e-115 418.3 263 77.2
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 4.8e-114 414.8 257 78.2
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 4.0e-113 411.8 255 76.1
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.2e-112 410.2 253 77.9
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 3.8e-111 405.2 257 75.5
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 3.2e-110 402.1 257 79.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 7.1e-110 401.0 257 75.5
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 7.9e-109 397.5 254 75.6
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 3.9e-108 395.2 257 74.3
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 5.1e-108 394.8 230 83.0
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.6e-106 389.8 417 52.3
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.8e-106 389.0 250 74.8
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 4.2e-102 375.2 281 69.4
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 6.0e-101 371.3 257 73.5
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 6.0e-101 371.3 223 80.7
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 1.9e-99 366.3 214 80.8
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 8.1e-98 360.9 231 74.9
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 2.9e-95 352.4 257 69.6
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 7.4e-91 337.8 256 65.2
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 2.1e-90 336.3 251 64.1
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.8e-89 333.2 247 65.2
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.8e-89 333.2 250 65.6
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.6e-88 329.3 198 80.8
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 3.0e-84 315.8 254 62.2
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.1e-83 313.9 153 98.7
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.2e-82 309.7 198 75.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 5.0e-71 271.9 159 84.9
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.1e-70 270.8 170 74.1
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 5.9e-64 248.4 142 81.7
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.6e-61 240.4 132 87.1
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 1.7e-58 230.3 254 48.0
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.4e-57 227.3 247 45.7
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 9.4e-54 214.5 130 78.5
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 8.8e-52 208.0 105 100.0
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 1.4e-49 200.7 198 57.6
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.8e-49 200.3 119 78.2
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 4.5e-48 195.7 199 54.8
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 6.5e-47 191.8 114 79.8
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 8.5e-47 191.4 267 38.6
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 5.5e-46 188.7 112 82.1
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 2.6e-43 179.9 105 82.9
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 5.7e-43 178.7 257 43.2
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 3.7e-42 176.0 105 82.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.8e-39 166.0 105 77.1
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 2.8e-37 159.8 104 75.0
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 1.2e-32 144.4 91 69.2
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.3e-31 141.0 116 61.2
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 8.3e-26 121.7 102 59.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.5e-22 110.2 95 60.0
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 3.6e-21 106.3 67 80.6
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.8e-20 104.0 60 80.0
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.9e-17 94.0 55 80.0
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.9e-09 67.4 58 63.8
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 4.3e-06 56.2 46 63.0


User provided reference genes

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