Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 1.2e-100 369.8 179 100.0
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 3.5e-84 315.1 210 77.1
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 3.0e-83 312.0 210 76.7
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 6.6e-83 310.8 207 77.3
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 2.5e-82 308.9 148 100.0
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 6.0e-76 287.7 162 86.4
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 2.3e-75 285.8 162 85.8
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-72 275.4 163 82.8
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 3.8e-70 268.5 162 83.3
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 3.8e-70 268.5 161 83.2
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 3.8e-70 268.5 162 83.3
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 3.8e-70 268.5 161 83.2
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 2.5e-66 255.8 210 64.8
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 9.0e-64 247.3 207 65.2
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.7e-60 235.7 159 70.4
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.5e-58 229.9 154 70.8
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-54 217.2 114 93.0
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.9e-54 215.7 155 67.7
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.8e-54 215.3 148 71.6
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 6.5e-54 214.5 144 70.8
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.5e-53 212.6 162 60.5
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 5.5e-53 211.5 164 61.0
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-52 208.8 158 62.7
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-51 207.2 165 59.4
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 1.0e-51 207.2 165 59.4
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 5.1e-51 204.9 171 59.1
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 5.1e-51 204.9 171 59.1
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 9.7e-50 200.7 162 68.5
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 6.3e-49 198.0 149 63.1
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 6.3e-49 198.0 149 63.1
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 4.1e-48 195.3 179 60.9
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.0e-46 190.7 163 58.3
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 9.4e-45 184.1 161 56.5
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.6e-44 181.8 118 72.9
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.0e-43 180.6 104 83.7
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.5e-42 176.0 163 52.1
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 6.9e-40 167.9 155 52.9
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.0e-39 166.4 163 50.9
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.0e-39 166.4 164 50.6
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.5e-37 158.3 141 53.9
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-35 152.9 155 51.0
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-34 150.6 177 45.8
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 2.0e-34 149.8 165 49.1
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 3.3e-34 149.1 147 51.0
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 4.4e-34 148.7 158 46.8
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 5.7e-34 148.3 158 50.0
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 7.4e-34 147.9 165 47.9
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 9.7e-34 147.5 155 49.0
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.7e-34 147.5 122 63.9
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-33 146.7 165 47.9
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 1.7e-33 146.7 165 47.9
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.2e-33 146.4 165 45.5
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-33 146.0 165 47.9
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 8.2e-33 144.4 151 47.0
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 8.2e-33 144.4 165 45.5
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 8.2e-33 144.4 163 47.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 8.2e-33 144.4 165 45.5
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 8.2e-33 144.4 151 47.0
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-32 142.9 165 47.3
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.4e-32 142.9 141 53.2
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.5e-30 134.4 135 48.9
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.6e-28 130.2 94 64.9
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.7e-28 129.4 131 51.9
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 5.7e-26 121.7 118 48.3
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 2.2e-25 119.8 154 41.6
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 3.7e-25 119.0 103 66.0
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 4.8e-25 118.6 156 40.4
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 7.7e-23 111.3 152 37.5
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.7e-20 102.1 85 62.4
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 8.0e-20 101.3 115 43.5
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-19 100.9 87 56.3
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 3.4e-18 95.9 109 49.5
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 1.7e-17 93.6 94 55.3
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.2e-15 87.4 66 56.1
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.2e-13 79.3 82 47.6
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 1.0e-11 74.3 82 50.0
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-11 73.9 58 53.4
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.6e-10 69.7 58 50.0
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 7.0e-08 61.6 54 53.7


User provided reference genes

Program Settings