Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39110H Brassica oleracea HOM05D006180 ORTHO05D008836 6.4e-95 350.9 198 100.0
BolC4t23579H Brassica oleracea HOM05D006180 ORTHO05D008836 2.5e-83 312.4 198 83.8
BolC8t47705H Brassica oleracea HOM05D006180 ORTHO05D008836 3.8e-79 298.5 198 83.8
BolC8t47047H Brassica oleracea HOM05D006180 ORTHO05D008836 1.9e-67 259.6 182 76.9
BolC2t09839H Brassica oleracea HOM05D006180 ORTHO05D008836 1.2e-64 250.4 198 70.2
BolC4t24699H Brassica oleracea HOM05D006180 ORTHO05D008836 8.2e-58 227.6 173 69.9
BolC1t03761H Brassica oleracea HOM05D006180 ORTHO05D008836 2.5e-54 216.1 167 74.3
BolC5t32857H Brassica oleracea HOM05D006180 ORTHO05D008836 9.7e-43 177.6 110 98.2
BolC5t33618H Brassica oleracea HOM05D006180 ORTHO05D008836 6.9e-41 171.4 180 56.7
BolC1t04228H Brassica oleracea HOM05D006180 ORTHO05D008836 7.7e-40 167.9 99 88.9
BolC9t56767H Brassica oleracea HOM05D006180 ORTHO05D008836 1.9e-38 163.3 160 57.5
BolC8t48220H Brassica oleracea HOM05D006180 ORTHO05D008836 1.6e-37 160.2 109 80.7
BolC9t57499H Brassica oleracea HOM05D006180 ORTHO05D008836 4.7e-37 158.7 110 79.1
BolC9t54116H Brassica oleracea HOM05D006180 ORTHO05D008836 1.0e-36 157.5 109 78.9
BolC6t37026H Brassica oleracea HOM05D006180 ORTHO05D008836 7.0e-33 144.8 110 71.8
BolC8t48539H Brassica oleracea HOM05D006180 ORTHO05D008836 1.4e-28 130.6 144 55.6
BolC2t09598H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-25 120.9 117 60.7
BcaC01g00122 Brassica carinata HOM05D006180 ORTHO05D008836 5.9e-24 115.2 70 81.4
BcaC05g28196 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-22 110.9 75 80.0
BcaC04g20321 Brassica carinata HOM05D006180 ORTHO05D008836 5.5e-22 108.6 75 78.7
BcaC01g00505 Brassica carinata HOM05D006180 ORTHO05D008836 9.4e-22 107.8 53 100.0
BcaC01g00832 Brassica carinata HOM05D006180 ORTHO05D008836 9.4e-22 107.8 53 100.0
BcaC03g15170 Brassica carinata HOM05D006180 ORTHO05D008836 9.4e-22 107.8 53 100.0
BcaC05g28158 Brassica carinata HOM05D006180 ORTHO05D008836 9.4e-22 107.8 110 56.4
BcaC03g15708 Brassica carinata HOM05D006180 ORTHO05D008836 2.7e-21 106.3 53 98.1
BcaC06g34760 Brassica carinata HOM05D006180 ORTHO05D008836 4.7e-21 105.5 75 76.0
BcaC03g14551 Brassica carinata HOM05D006180 ORTHO05D008836 6.1e-21 105.1 75 76.0
BcaC02g09943 Brassica carinata HOM05D006180 ORTHO05D008836 8.0e-21 104.8 53 98.1
BcaC05g27396 Brassica carinata HOM05D006180 ORTHO05D008836 6.8e-20 101.7 53 94.3
BcaC03g17963 Brassica carinata HOM05D006180 ORTHO05D008836 8.8e-20 101.3 53 92.5
BcaC03g18136 Brassica carinata HOM05D006180 ORTHO05D008836 8.8e-20 101.3 75 74.7
BraSC37t46161Z Brassica rapa HOM05D006180 ORTHO05D008836 2.0e-19 100.1 126 49.2
BcaC01g05412 Brassica carinata HOM05D006180 ORTHO05D008836 2.6e-19 99.8 53 92.5
BcaC09g51369 Brassica carinata HOM05D006180 ORTHO05D008836 2.6e-19 99.8 53 92.5
BcaC06g35447 Brassica carinata HOM05D006180 ORTHO05D008836 3.4e-19 99.4 75 73.3
BolC6t37319H Brassica oleracea HOM05D006180 ORTHO05D008836 5.7e-19 98.6 104 54.8
BcaC06g34325 Brassica carinata HOM05D006180 ORTHO05D008836 9.8e-19 97.8 53 92.5
BcaC09g49716 Brassica carinata HOM05D006180 ORTHO05D008836 9.8e-19 97.8 53 90.6
BcaC09g49718 Brassica carinata HOM05D006180 ORTHO05D008836 9.8e-19 97.8 53 90.6
BcaC02g09301 Brassica carinata HOM05D006180 ORTHO05D008836 1.7e-18 97.1 53 90.6
BcaC01g02066 Brassica carinata HOM05D006180 ORTHO05D008836 2.2e-18 96.7 75 69.3
BcaC03g16121 Brassica carinata HOM05D006180 ORTHO05D008836 2.2e-18 96.7 48 97.9
BcaC02g11478 Brassica carinata HOM05D006180 ORTHO05D008836 8.3e-18 94.7 52 86.5
BcaC09g49323 Brassica carinata HOM05D006180 ORTHO05D008836 1.1e-17 94.4 75 69.3
BcaC01g02996 Brassica carinata HOM05D006180 ORTHO05D008836 1.8e-17 93.6 53 84.9
Thhalv10003118m.g Eutrema salsugineum HOM05D012374 ORTHO05D008836 1.8e-17 93.6 163 39.3
BcaC05g27335 Brassica carinata HOM05D006180 ORTHO05D008836 2.4e-17 93.2 53 86.8
BcaC09g52213 Brassica carinata HOM05D006180 ORTHO05D008836 3.1e-17 92.8 76 71.1
BcaC03g14526 Brassica carinata HOM05D006180 ORTHO05D008836 4.1e-17 92.4 53 86.8
BcaC04g20735 Brassica carinata HOM05D006180 ORTHO05D008836 4.1e-17 92.4 53 86.8
BcaC05g27953 Brassica carinata HOM05D006180 ORTHO05D008836 4.1e-17 92.4 53 86.8
BcaC02g11249 Brassica carinata HOM05D006180 ORTHO05D008836 5.4e-17 92.0 53 86.8
BcaC06g35269 Brassica carinata HOM05D006180 ORTHO05D008836 2.0e-16 90.1 53 83.0
BcaC01g02220 Brassica carinata HOM05D006180 ORTHO05D008836 3.5e-16 89.4 53 81.1
BcaC02g09618 Brassica carinata HOM05D006180 ORTHO05D008836 1.3e-15 87.4 75 64.0
C03p46810 Brassica napus HOM05D000643 ORTHO05D008836 1.3e-15 87.4 134 41.8
BcaC05g25634 Brassica carinata HOM05D006180 ORTHO05D011628 1.7e-15 87.0 52 80.8
BcaC04g22517 Brassica carinata HOM05D006180 ORTHO05D008836 2.2e-15 86.7 53 79.2
BcaC03g17920 Brassica carinata HOM05D006180 ORTHO05D008836 1.5e-14 84.0 53 79.2
BolC2t09130H Brassica oleracea HOM05D006180 ORTHO05D008836 3.2e-14 82.8 46 91.3
BcaC05g27563 Brassica carinata HOM05D006180 ORTHO05D008836 5.5e-14 82.0 53 75.5
BcaC02g09360 Brassica carinata HOM05D006180 ORTHO05D008836 7.2e-14 81.6 53 75.5
BcaC02g10840 Brassica carinata HOM05D006180 ORTHO05D008836 9.4e-14 81.3 73 64.4
BcaC01g02476 Brassica carinata HOM05D006180 ORTHO05D008836 3.6e-13 79.3 53 73.6
BcaC03g16175 Brassica carinata HOM05D006180 ORTHO05D008836 8.0e-13 78.2 53 71.7
BcaC04g21256 Brassica carinata HOM05D006180 ORTHO05D008836 1.0e-12 77.8 75 56.0
BolC4t24632H Brassica oleracea HOM05D006180 ORTHO05D008836 3.0e-12 76.3 63 69.8
BcaC08g44300 Brassica carinata HOM05D006180 ORTHO05D008836 4.0e-12 75.9 53 71.7
BcaC05g28517 Brassica carinata HOM05D006180 ORTHO05D008836 8.8e-12 74.7 48 77.1
BcaC02g10249 Brassica carinata HOM05D003421 ORTHO05D039416 1.2e-11 74.3 52 71.2
BcaC03g17026 Brassica carinata HOM05D006180 ORTHO05D008836 1.2e-11 74.3 53 69.8
BcaC01g01018 Brassica carinata HOM05D006180 ORTHO05D008836 4.4e-11 72.4 71 69.0
BcaB02g11247 Brassica carinata HOM05D006180 ORTHO05D018575 5.7e-11 72.0 92 51.1
BcaC04g21441 Brassica carinata HOM05D006180 ORTHO05D008836 5.7e-11 72.0 53 67.9
BcaC04g18643 Brassica carinata HOM05D006180 ORTHO05D008836 4.9e-10 68.9 75 58.7
BcaC05g28906 Brassica carinata HOM05D006180 ORTHO05D008836 4.9e-10 68.9 70 50.0
BolC2t07858H Brassica oleracea HOM05D006180 ORTHO05D008836 4.9e-10 68.9 60 66.7
BcaC03g14054 Brassica carinata HOM05D011111 ORTHO05D001112 8.3e-10 68.2 131 32.8
BcaC07g37623 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-09 67.4 50 64.0
BcaC09g48829 Brassica carinata HOM05D006180 ORTHO05D008836 1.4e-09 67.4 45 75.6
BolC8t47023H Brassica oleracea HOM05D011111 ORTHO05D001112 1.8e-09 67.0 131 32.1
BolC5t29748H Brassica oleracea HOM05D011111 ORTHO05D001112 2.4e-09 66.6 122 33.6
BcaC08g44213 Brassica carinata HOM05D006180 ORTHO05D008836 3.1e-09 66.2 53 66.0
BraA05t21281Z Brassica rapa HOM05D006180 ORTHO05D008836 3.1e-09 66.2 155 34.8
BcaC08g44330 Brassica carinata HOM05D011111 ORTHO05D001112 4.1e-09 65.9 131 32.1
BcaC02g12833 Brassica carinata HOM05D006180 ORTHO05D008836 2.0e-08 63.5 56 64.3
BcaC02g11176 Brassica carinata HOM05D011111 ORTHO05D001112 2.7e-08 63.2 122 35.2
BcaC04g20770 Brassica carinata HOM05D011111 ORTHO05D001112 2.7e-08 63.2 121 33.9
Sp5g17320 Schrenkiella parvula HOM05D012374 ORTHO05D017111 3.5e-08 62.8 96 36.5
A02p24700 Brassica napus HOM05D030042 ORTHO05D027534 1.0e-07 61.2 109 38.5
BcaC01g00014 Brassica carinata HOM05D006180 ORTHO05D008836 1.7e-07 60.5 53 64.2
THA.LOC104798935 Tarenaya hassleriana HOM05D013951 ORTHO05D011833 2.3e-07 60.1 103 35.9
THA.LOC109117165 Tarenaya hassleriana HOM05D013951 ORTHO05D000001 2.3e-07 60.1 103 35.9
BcaC01g03172 Brassica carinata HOM05D011111 ORTHO05D001112 2.9e-07 59.7 106 36.8
THA.LOC104814055 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 5.0e-07 58.9 103 35.0
BcaC03g13665 Brassica carinata HOM05D006180 ORTHO05D008836 1.9e-06 57.0 73 49.3
BcaC03g15400 Brassica carinata HOM05D006180 ORTHO05D008836 1.9e-06 57.0 73 49.3
BcaC06g36092 Brassica carinata HOM05D006180 ORTHO05D008836 1.9e-06 57.0 61 54.1
BcaC09g49922 Brassica carinata HOM05D006180 ORTHO05D008836 1.9e-06 57.0 73 49.3
BraA08t32449Z Brassica rapa HOM05D006180 ORTHO05D108130 1.9e-06 57.0 103 33.0
Sp7g08650 Schrenkiella parvula HOM05D012374 ORTHO05D017111 2.5e-06 56.6 94 34.0
THA.LOC104805039 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 2.5e-06 56.6 108 30.6
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 5.6e-06 55.5 103 34.0
BcaB05g23751 Brassica carinata HOM05D006180 ORTHO05D008836 9.5e-06 54.7 86 44.2
THA.LOC104815515 Tarenaya hassleriana HOM05D020332 ORTHO05D011833 9.5e-06 54.7 103 34.0


User provided reference genes

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