Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 2.6e-80 302.0 150 100.0
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 1.6e-69 266.2 136 96.3
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 2.7e-69 265.4 136 96.3
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 2.7e-69 265.4 136 96.3
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 7.1e-62 240.7 123 96.7
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 3.9e-60 235.0 123 94.3
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-50 203.0 129 77.5
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 9.0e-49 197.2 136 68.4
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 9.0e-49 197.2 136 68.4
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 1.3e-47 193.4 136 68.4
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-47 193.4 136 66.9
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 1.3e-47 193.4 136 68.4
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 1.7e-47 193.0 136 68.4
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 2.2e-47 192.6 136 67.6
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 2.2e-47 192.6 136 69.1
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 2.2e-47 192.6 136 67.6
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 6.0e-45 184.5 128 69.5
BraA09t37976Z Brassica rapa HOM05D008292 ORTHO05D003352 1.7e-44 183.0 169 58.6
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 5.6e-43 177.9 158 59.5
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.8e-42 175.6 149 61.7
BolC7t41257H Brassica oleracea HOM05D008292 ORTHO05D003352 3.6e-42 175.3 91 95.6
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 1.8e-41 172.9 131 64.1
BcaC02g08358 Brassica carinata HOM05D008292 ORTHO05D003352 1.7e-39 166.4 136 59.6
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 1.9e-38 162.9 100 79.0
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 1.8e-36 156.4 136 53.7
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 3.7e-34 148.7 135 54.1
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 8.1e-34 147.5 129 57.4
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 3.4e-32 142.1 136 51.5
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 3.4e-32 142.1 136 51.5
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 1.1e-30 137.1 123 51.2
BcaB05g23849 Brassica carinata HOM05D008292 ORTHO05D003352 2.4e-30 136.0 120 59.2
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 9.3e-30 134.0 88 68.2
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 2.1e-29 132.9 123 52.0
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 2.1e-29 132.9 123 52.0
BcaC07g41300 Brassica carinata HOM05D008292 ORTHO05D003352 2.3e-28 129.4 122 57.4
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 1.1e-27 127.1 72 80.6
BcaC02g11488 Brassica carinata HOM05D008292 ORTHO05D003352 4.3e-27 125.2 115 52.2
C04p14850 Brassica napus HOM05D008292 ORTHO05D003352 4.3e-27 125.2 115 52.2
BolC4t23058H Brassica oleracea HOM05D008292 ORTHO05D003352 4.3e-27 125.2 117 51.3
C03p73890 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-26 123.6 91 63.7
BcaC07g40693 Brassica carinata HOM05D008292 ORTHO05D003352 6.9e-25 117.9 123 50.4
C05p31020 Brassica napus HOM05D008292 ORTHO05D003352 5.5e-22 108.2 136 42.6
BolC5t31825H Brassica oleracea HOM05D008292 ORTHO05D003352 1.2e-21 107.1 136 42.6
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 2.1e-21 106.3 135 40.7
C03p76730 Brassica napus HOM05D008292 ORTHO05D003352 5.1e-20 101.7 61 72.1
BcaC05g27196 Brassica carinata HOM05D008292 ORTHO05D003352 1.5e-19 100.1 123 43.9
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 2.5e-19 99.4 135 37.8
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.9e-17 91.3 136 36.0
AT3G30430 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 3.4e-16 89.0 113 40.7
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 3.8e-15 85.5 129 38.0
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-15 85.5 130 33.8
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-14 83.6 125 36.8
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-14 83.6 129 37.2
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-13 80.5 122 36.1
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-13 80.1 127 36.2
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-13 80.1 127 36.2
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-13 78.6 126 29.4
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-13 78.6 126 29.4
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.6e-13 78.6 131 33.6
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-12 77.4 116 37.1
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-12 76.6 129 34.9
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-12 76.6 132 34.8
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 5.1e-12 75.1 130 31.5
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 8.8e-12 74.3 80 38.8
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-11 73.9 84 39.3
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-11 73.9 84 39.3
BolC1t04612H Brassica oleracea HOM05D008292 ORTHO05D003352 1.5e-11 73.6 44 70.5
BolC3t21217H Brassica oleracea HOM05D008292 ORTHO05D003352 1.5e-11 73.6 44 70.5
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-11 73.6 117 36.8
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-11 73.2 79 41.8
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 3.3e-11 72.4 132 34.8
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-11 72.4 83 41.0
BolC3t14353H Brassica oleracea HOM05D008292 ORTHO05D003352 4.3e-11 72.0 44 68.2
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-10 70.5 80 38.8
AT1G14800 Arabidopsis thaliana HOM05D000313 ORTHO05D000065 1.7e-10 70.1 71 45.1
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 8.2e-10 67.8 128 30.5
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-09 67.4 63 44.4
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-09 67.0 127 29.9
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 5.3e-09 65.1 68 41.2
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 6.9e-09 64.7 71 43.7
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 6.9e-09 64.7 123 22.8
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-08 63.9 68 38.2
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-08 63.9 68 38.2
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-08 63.9 59 44.1
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.2e-08 63.9 122 27.0
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 1.5e-08 63.5 87 34.5
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.5e-08 63.5 115 26.1
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-08 63.2 88 37.5
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-08 62.4 100 34.0
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 3.4e-08 62.4 100 34.0
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-07 60.8 82 36.6
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-07 60.8 110 32.7
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-07 60.8 114 28.9
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-07 60.8 100 32.0
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-07 60.8 100 32.0
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-07 60.8 100 33.0
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.0e-07 60.8 114 28.9
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 1.3e-07 60.5 148 27.0
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 1.3e-07 60.5 148 27.0
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-07 60.5 114 28.9
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-07 60.5 114 28.9
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-07 60.5 114 28.9
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-07 60.5 114 28.9
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.3e-07 60.5 124 23.4
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 1.7e-07 60.1 84 35.7
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.7e-07 60.1 86 31.4
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 1.7e-07 60.1 129 25.6
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.7e-07 60.1 57 42.1
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.7e-07 60.1 118 26.3
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-07 59.7 102 32.4
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 2.9e-07 59.3 138 25.4
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-07 59.3 66 36.4
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-07 59.3 103 32.0
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-07 59.3 93 31.2
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-07 59.3 114 28.9
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 3.8e-07 58.9 145 27.6
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-07 58.9 110 30.0
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-07 58.9 101 29.7
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 3.8e-07 58.9 114 28.9
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-07 58.9 133 27.8
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-07 58.5 83 36.1
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-07 58.5 101 29.7
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-07 58.5 78 33.3
A08p12750 Brassica napus HOM05D008292 ORTHO05D003352 5.0e-07 58.5 37 73.0
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-07 58.5 115 27.0
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-07 58.5 78 33.3
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-07 58.5 115 27.0
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 5.0e-07 58.5 101 29.7
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 5.0e-07 58.5 104 29.8
BraA08t33263Z Brassica rapa HOM05D008292 ORTHO05D003352 5.0e-07 58.5 37 73.0
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 5.0e-07 58.5 122 26.2
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 5.0e-07 58.5 127 23.6
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 5.0e-07 58.5 136 26.5
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 5.0e-07 58.5 123 28.5
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-07 58.2 108 29.6
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-07 58.2 77 37.7
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-07 58.2 110 29.1
BcaB08g35019 Brassica carinata HOM05D008883 ORTHO05D011075 6.5e-07 58.2 123 29.3
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 6.5e-07 58.2 129 23.3
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 6.5e-07 58.2 129 23.3
AT1G67623 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 8.5e-07 57.8 124 30.6
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-07 57.8 114 28.1
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-07 57.8 114 28.1
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-07 57.8 64 35.9
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 8.5e-07 57.8 56 42.9
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 8.5e-07 57.8 151 25.8
SpUn0486_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 8.5e-07 57.8 119 29.4
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 1.1e-06 57.4 100 31.0
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-06 57.0 111 29.7
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-06 57.0 112 26.8
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-06 57.0 84 32.1
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.4e-06 57.0 129 22.5
SpUn0003_0120 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.4e-06 57.0 122 27.9
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-06 56.6 83 32.5
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.9e-06 56.6 136 25.0
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-06 56.2 60 40.0
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-06 56.2 110 28.2
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-06 56.2 98 31.6
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-06 56.2 53 43.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 2.5e-06 56.2 114 28.1
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.5e-06 56.2 137 24.1
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.5e-06 56.2 136 25.7
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.5e-06 56.2 136 25.0
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-06 55.8 104 32.7
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-06 55.8 64 35.9
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 3.2e-06 55.8 139 25.9
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 3.2e-06 55.8 126 27.8
TPR.G19429 Trifolium pratense HOM05D002915 ORTHO05D003004 3.2e-06 55.8 130 26.2
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-06 55.5 72 31.9
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-06 55.5 118 27.1
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 4.2e-06 55.5 121 23.1
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-06 55.1 100 32.0
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-06 55.1 60 40.0
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 5.5e-06 55.1 130 24.6
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 54.7 74 35.1
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 7.2e-06 54.7 113 27.4
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 7.2e-06 54.7 114 27.2
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 7.2e-06 54.7 113 27.4
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 7.2e-06 54.7 131 28.2
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-06 54.3 110 28.2
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-06 54.3 65 32.3
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 9.4e-06 54.3 124 27.4
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 9.4e-06 54.3 69 37.7
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 9.4e-06 54.3 85 31.8
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 9.4e-06 54.3 128 23.4
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 9.4e-06 54.3 120 25.8


User provided reference genes

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