Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 5.7e-261 903.7 444 100.0
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 2.5e-232 808.5 444 91.7
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 4.9e-228 794.3 444 90.5
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 4.9e-228 794.3 444 90.5
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.4e-219 765.4 425 90.6
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 7.6e-213 743.8 423 88.4
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 2.4e-206 722.2 446 82.3
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 5.8e-205 717.6 446 82.3
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 9.3e-195 683.7 451 77.8
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.3e-193 679.1 448 78.1
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.3e-193 679.1 451 77.4
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 2.2e-188 662.5 438 77.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 6.5e-172 607.8 428 72.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.1e-155 553.9 428 66.8
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.7e-141 506.1 453 59.6
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.0e-140 504.2 434 59.4
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 2.8e-138 496.1 438 59.1
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.6e-138 495.7 434 58.5
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.7e-138 495.4 450 57.8
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.8e-137 493.4 435 59.3
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.3e-137 493.0 424 60.8
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.2e-136 490.7 435 57.7
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-136 490.3 448 57.1
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 6.4e-135 485.0 445 56.9
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.4e-134 483.0 453 56.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.4e-134 483.0 436 58.3
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 4.1e-134 482.3 442 57.7
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 7.0e-134 481.5 447 57.0
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.2e-133 480.7 421 60.1
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.2e-133 480.7 437 57.7
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.7e-133 479.6 456 57.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 6.0e-133 478.4 433 57.7
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.3e-132 477.2 443 55.8
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 2.3e-132 476.5 446 55.8
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.9e-132 475.7 418 58.9
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 1.1e-131 474.2 414 58.9
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.1e-131 474.2 419 58.9
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.5e-131 473.8 444 55.6
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.5e-131 473.8 419 58.9
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.9e-131 473.4 446 57.2
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 3.3e-131 472.6 456 54.6
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 4.3e-131 472.2 451 53.9
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.3e-131 472.2 423 58.6
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 4.3e-131 472.2 419 57.0
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 5.6e-131 471.9 435 56.8
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 7.3e-131 471.5 451 55.9
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.6e-130 470.3 454 56.2
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.6e-130 470.3 449 56.6
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.6e-130 470.3 445 56.2
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.1e-130 469.9 448 55.8
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.6e-130 469.2 441 57.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.6e-130 469.2 435 56.3
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 4.7e-130 468.8 446 55.6
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.3e-129 466.5 449 55.7
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 3.1e-129 466.1 446 54.7
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 4.0e-129 465.7 443 55.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 3.4e-128 462.6 448 57.1
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 7.5e-128 461.5 439 54.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 9.8e-128 461.1 422 58.1
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.3e-127 460.7 414 58.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-124 451.1 477 52.0
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.9e-123 446.8 439 53.5
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 6.2e-122 441.8 453 54.1
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.3e-121 439.9 442 52.3
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.9e-120 434.5 435 53.6
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.9e-118 430.3 412 55.3
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.2e-117 427.6 437 51.9
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 7.8e-117 424.9 417 52.8
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.0e-116 424.5 441 52.8
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.7e-116 423.7 496 49.8
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.9e-115 420.2 374 58.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 5.6e-115 418.7 411 52.3
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 5.2e-113 412.1 415 51.3
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 9.9e-112 407.9 447 49.2
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 9.9e-112 407.9 449 48.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 7.8e-109 398.3 349 57.9
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 3.0e-108 396.4 410 50.0
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 8.1e-106 388.3 461 46.6
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.1e-105 386.3 415 49.4
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.9e-105 385.2 334 58.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 8.4e-103 378.3 328 57.6
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 2.1e-101 373.6 403 50.6
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.6e-98 364.0 324 55.6
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.4e-97 360.9 355 53.5
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.0e-96 357.1 347 54.8
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.3e-95 354.4 422 45.7
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.0e-84 316.6 336 47.6
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.7e-79 300.8 301 55.5
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 6.1e-77 292.4 316 53.2
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 3.9e-76 289.7 269 56.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.9e-71 273.5 311 47.9
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 4.3e-67 259.6 205 65.4
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.2e-66 257.3 264 53.4
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.1e-65 253.4 426 38.7
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.4e-60 238.0 260 48.5
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.1e-53 212.6 159 65.4
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 7.7e-48 195.7 193 57.5
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.3e-47 194.9 417 31.9
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 9.4e-46 188.7 241 40.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.3e-36 157.5 147 55.1
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.4e-33 146.4 197 45.2
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.2e-32 145.2 429 28.0
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.6e-29 134.8 125 51.2
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 2.0e-27 127.9 116 57.8
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.2e-26 124.4 105 63.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 5.4e-25 119.8 93 66.7
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 2.3e-23 114.4 66 87.9
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 9.5e-22 109.0 82 64.6
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.4e-17 95.1 425 24.7
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-14 85.5 153 36.6
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 5.6e-14 83.2 417 22.1
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 4.7e-13 80.1 68 50.0
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 9.8e-11 72.4 428 23.1
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 2.9e-10 70.9 76 53.9
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.4e-09 68.6 67 56.7
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 2.1e-08 64.7 68 50.0
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.7e-07 61.6 408 21.1
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.7e-07 61.6 89 38.2


User provided reference genes

Program Settings