Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p37490 Brassica napus HOM05D006290 ORTHO05D007734 1.8e-58 229.2 125 100.0
BolC6t38851H Brassica oleracea HOM05D006290 ORTHO05D007734 1.8e-58 229.2 125 100.0
BraA07t30820Z Brassica rapa HOM05D006290 ORTHO05D007734 4.4e-57 224.6 126 99.2
A07p31920 Brassica napus HOM05D006290 ORTHO05D007734 1.3e-56 223.0 126 98.4
BcaC08g45955 Brassica carinata HOM05D006290 ORTHO05D007734 2.8e-56 221.9 125 98.4
C02p25020 Brassica napus HOM05D006290 ORTHO05D007734 1.2e-49 199.9 117 93.2
BcaB03g15431 Brassica carinata HOM05D006290 ORTHO05D007734 3.3e-49 198.4 117 95.7
BraA02t06584Z Brassica rapa HOM05D006290 ORTHO05D007734 3.3e-49 198.4 117 92.3
BolC2t08586H Brassica oleracea HOM05D006290 ORTHO05D007734 5.7e-49 197.6 117 92.3
A02p15210 Brassica napus HOM05D006290 ORTHO05D007734 3.7e-48 194.9 117 90.6
Thhalv10019326m.g Eutrema salsugineum HOM05D006290 ORTHO05D007734 8.2e-48 193.7 119 92.4
BcaB05g24400 Brassica carinata HOM05D006290 ORTHO05D007734 1.8e-47 192.6 117 89.7
BcaC03g14971 Brassica carinata HOM05D006290 ORTHO05D007734 4.1e-47 191.4 117 91.5
Sp5g23690 Schrenkiella parvula HOM05D006290 ORTHO05D007734 1.2e-46 189.9 117 92.3
AL2G27490 Arabidopsis lyrata HOM05D006290 ORTHO05D007734 6.1e-43 177.6 117 86.3
Carub.0002s1512 Capsella rubella HOM05D006290 ORTHO05D007734 4.4e-41 171.4 109 89.0
AT1G68585 Arabidopsis thaliana HOM05D006290 ORTHO05D007734 9.8e-41 170.2 117 82.9
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 1.2e-35 153.3 118 76.3
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 1.1e-31 140.2 114 71.1
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 1.2e-30 136.7 109 75.2
C06p41250 Brassica napus HOM05D006290 ORTHO05D007734 4.3e-20 101.7 61 88.5
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 4.0e-18 95.1 103 57.3
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 2.0e-17 92.8 105 52.4
BcaC08g45952 Brassica carinata HOM05D006290 ORTHO05D007734 3.4e-17 92.0 60 91.7
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 2.2e-16 89.4 105 52.4
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 8.3e-16 87.4 105 51.4
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.1e-15 87.0 96 56.2
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 1.4e-15 86.7 96 54.2
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 1.9e-15 86.3 97 55.7
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 2.4e-15 85.9 74 62.2
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 7.0e-15 84.3 104 52.9
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 9.2e-15 84.0 98 48.0
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 9.2e-15 84.0 100 53.0
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 2.1e-14 82.8 78 61.5
Hma1.2p1_3293F.1_g334960 Hydrangea macrophylla HOM05D006290 ORTHO05D007734 2.1e-14 82.8 100 47.0
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 4.6e-14 81.6 97 51.5
Oeu033294.1 Olea europaea HOM05D006290 ORTHO05D007734 6.0e-14 81.3 88 46.6
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 7.8e-14 80.9 104 48.1
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 1.0e-13 80.5 65 60.0
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 1.0e-13 80.5 90 51.1
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.0e-13 80.5 72 61.1
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 1.3e-13 80.1 99 48.5
Nitab4.5_0001914g0020 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.3e-13 80.1 94 51.1
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 1.7e-13 79.7 89 56.2
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.3e-13 79.3 112 49.1
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.3e-13 79.3 112 49.1
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 2.3e-13 79.3 112 49.1
SGA_v2.0_scaffold124G33547 Striga asiatica HOM05D006290 ORTHO05D007734 3.0e-13 79.0 61 60.7
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 3.9e-13 78.6 103 44.7
Medtr1g111150 Medicago truncatula HOM05D006290 ORTHO05D007734 3.9e-13 78.6 100 49.0
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 5.1e-13 78.2 68 60.3
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 6.6e-13 77.8 79 54.4
vmacro10549 Vaccinium macrocarpon HOM05D006290 ORTHO05D007734 6.6e-13 77.8 70 60.0
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 8.6e-13 77.4 103 52.4
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 8.6e-13 77.4 78 60.3
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 8.6e-13 77.4 78 60.3
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 8.6e-13 77.4 61 62.3
MSTRG.826 Avicennia marina HOM05D006290 ORTHO05D007734 1.9e-12 76.3 94 42.6
GSVIVG01011914001 Vitis vinifera HOM05D006290 ORTHO05D007734 1.9e-12 76.3 68 61.8
MSTRG.13517 Avicennia marina HOM05D006290 ORTHO05D007734 2.5e-12 75.9 61 57.4
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 2.5e-12 75.9 71 54.9
Lj5g0001389 Lotus japonicus HOM05D006290 ORTHO05D007734 2.5e-12 75.9 75 54.7
DCAR_007237 Daucus carota HOM05D006290 ORTHO05D007734 3.3e-12 75.5 121 45.5
Oeu020586.1 Olea europaea HOM05D006290 ORTHO05D007734 3.3e-12 75.5 106 43.4
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 7.3e-12 74.3 98 44.9
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 9.5e-12 73.9 75 54.7
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 9.5e-12 73.9 71 56.3
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 1.2e-11 73.6 81 55.6
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 2.1e-11 72.8 88 52.3
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 2.1e-11 72.8 69 60.9
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 2.1e-11 72.8 97 47.4
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 2.8e-11 72.4 107 48.6
Manes.06G069950 Manihot esculenta HOM05D006290 ORTHO05D007734 2.8e-11 72.4 75 57.3
arahy.Tifrunner.gnm1.ann1.89WS3K Arachis hypogaea HOM05D006290 ORTHO05D007734 4.7e-11 71.6 66 59.1
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 6.2e-11 71.2 60 58.3
arahy.Tifrunner.gnm1.ann1.N6V5UD Arachis hypogaea HOM05D006290 ORTHO05D007734 8.1e-11 70.9 66 59.1
Nitab4.5_0003285g0030 Nicotiana tabacum HOM05D006290 ORTHO05D007734 8.1e-11 70.9 100 41.0
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 8.1e-11 70.9 98 41.8
TPR.G38332 Trifolium pratense HOM05D006290 ORTHO05D007734 8.1e-11 70.9 58 60.3
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 1.4e-10 70.1 85 44.7
Glyma.08G263700 Glycine max HOM05D006290 ORTHO05D007734 1.4e-10 70.1 98 43.9
TPR.G26319 Trifolium pratense HOM05D006290 ORTHO05D007734 1.4e-10 70.1 66 57.6
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 1.8e-10 69.7 81 50.6
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 2.3e-10 69.3 96 41.7
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 2.3e-10 69.3 68 51.5
HanXRQChr17g0567961 Helianthus annuus HOM05D006290 ORTHO05D007734 3.1e-10 68.9 114 38.6
Medtr5g055200 Medicago truncatula HOM05D006290 ORTHO05D007734 3.1e-10 68.9 94 46.8
ECA234G1725 Erigeron canadensis HOM05D006290 ORTHO05D007734 4.0e-10 68.6 106 38.7
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 4.0e-10 68.6 74 50.0
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 5.2e-10 68.2 51 66.7
Lalb_Chr17g0342051 Lupinus albus HOM05D006290 ORTHO05D007734 5.2e-10 68.2 60 58.3
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 5.2e-10 68.2 82 43.9
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 6.8e-10 67.8 82 48.8
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 8.9e-10 67.4 99 46.5
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 1.2e-09 67.0 93 45.2
Sc14g0007550 Simmondsia chinensis HOM05D006290 ORTHO05D007734 1.5e-09 66.6 68 52.9
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 2.6e-09 65.9 60 55.0
HanXRQChr16g0529651 Helianthus annuus HOM05D006290 ORTHO05D007734 4.4e-09 65.1 112 39.3
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 7.5e-09 64.3 60 53.3
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 7.5e-09 64.3 84 45.2
CiPaw.16G064000 Carya illinoinensis HOM05D006290 ORTHO05D007734 1.3e-08 63.5 48 64.6
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 1.3e-08 63.5 66 54.5
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 1.7e-08 63.2 72 52.8
Lsat_1_v5_gn_4_18480 Lactuca sativa HOM05D006290 ORTHO05D007734 1.7e-08 63.2 69 46.4
unitig_26.g10264 Utricularia gibba HOM05D000483 ORTHO05D000158 2.2e-08 62.8 59 50.8
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.9e-08 62.4 139 37.4
FAN12G1280 Fragaria x ananassa HOM05D006290 ORTHO05D007734 3.7e-08 62.0 93 45.2
Solyc05g150121.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 8.3e-08 60.8 61 54.1
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.1e-07 60.5 141 35.5
MBI12_g30235_MAGBIO Magnolia biondii HOM05D006290 ORTHO05D007734 3.2e-07 58.9 65 49.2
MELO3C012234.2 Cucumis melo HOM05D006290 ORTHO05D007734 7.1e-07 57.8 56 53.6
HanXRQChr15g0477181 Helianthus annuus HOM05D006290 ORTHO05D007734 9.2e-07 57.4 87 37.9
HanXRQChr17g0552191 Helianthus annuus HOM05D006290 ORTHO05D007734 1.2e-06 57.0 92 37.0
MD16G1044400 Malus domestica HOM05D006290 ORTHO05D007734 1.2e-06 57.0 44 61.4
ECA246G4651 Erigeron canadensis HOM05D006290 ORTHO05D007734 2.1e-06 56.2 58 44.8
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 2.1e-06 56.2 71 46.5


User provided reference genes

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