Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t38816H Brassica oleracea HOM05D000017 ORTHO05D043147 1.6e-73 279.3 137 100.0
BolC3t20536H Brassica oleracea HOM05D032347 ORTHO05D018801 5.0e-14 81.6 58 70.7
BraA04t16844Z Brassica rapa HOM05D000017 ORTHO05D043147 1.2e-12 77.0 46 76.1
THA.LOC104817083 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.1e-12 76.3 78 46.2
THA.LOC109116550 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.0e-11 73.9 75 45.3
THA.LOC104807849 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.8e-11 73.2 75 42.7
THA.LOC104820474 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.2e-11 71.6 77 42.9
THA.LOC104801856 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-09 66.6 68 44.1
THA.LOC104815169 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.7e-09 65.5 76 40.8
Atru.chr2.1582 Acer truncatum HOM05D000017 ORTHO05D000013 4.8e-09 65.1 64 42.2
THA.LOC104815186 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.3e-09 64.7 76 42.1
BolC1t01560H Brassica oleracea HOM05D000017 ORTHO05D000013 8.3e-09 64.3 86 44.2
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.8e-08 63.2 62 41.9
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 1.8e-08 63.2 64 40.6
CANSAT21G0561 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 63.2 61 50.8
CANSAT35G0303 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 63.2 65 49.2
CANSAT56G3039 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-08 63.2 61 50.8
THA.LOC104810141 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.8e-08 63.2 76 40.8
THA.LOC104824926 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.4e-08 62.8 68 42.6
THA.LOC109116511 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.4e-08 62.8 76 40.8
Oeu034772.1 Olea europaea HOM05D000017 ORTHO05D000013 4.1e-08 62.0 67 37.3
THA.LOC104821604 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.1e-08 62.0 72 40.3
THA.LOC104801857 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.4e-08 61.6 60 43.3
Atru.chr12.1641 Acer truncatum HOM05D000017 ORTHO05D000013 9.1e-08 60.8 64 40.6
BolC8t47838H Brassica oleracea HOM05D008841 ORTHO05D010543 9.1e-08 60.8 39 71.8
Oeu026648.1 Olea europaea HOM05D000017 ORTHO05D000013 9.1e-08 60.8 63 38.1
Atru.chr10.1380 Acer truncatum HOM05D000020 ORTHO05D000013 1.2e-07 60.5 71 39.4
Atru.chr3.716 Acer truncatum HOM05D041478 ORTHO05D000013 1.2e-07 60.5 71 39.4
Atru.chr4.292 Acer truncatum HOM05D041478 ORTHO05D000013 1.2e-07 60.5 71 39.4
CANSAT11G1763 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 60.5 74 43.2
Atru.chr2.727 Acer truncatum HOM05D041478 ORTHO05D000013 1.6e-07 60.1 56 46.4
Atru.chr9.489 Acer truncatum HOM05D000017 ORTHO05D000013 1.6e-07 60.1 58 43.1
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 2.0e-07 59.7 79 36.7
Oeu057074.1 Olea europaea HOM05D000017 ORTHO05D000013 2.7e-07 59.3 67 35.8
THA.LOC104807875 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.7e-07 59.3 79 39.2
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 3.5e-07 58.9 62 38.7
Oeu028266.1 Olea europaea HOM05D000017 ORTHO05D000013 3.5e-07 58.9 61 44.3
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 4.5e-07 58.5 71 39.4
Atru.chr7.1109 Acer truncatum HOM05D000017 ORTHO05D000013 4.5e-07 58.5 71 39.4
Oeu034870.1 Olea europaea HOM05D000017 ORTHO05D000013 5.9e-07 58.2 70 37.1
CANSAT25G1098 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-07 57.8 67 40.3
Oeu005445.1 Olea europaea HOM05D000017 ORTHO05D000013 7.7e-07 57.8 67 43.3
Oeu030589.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-06 57.4 67 35.8
Atru.chr9.234 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-06 57.0 64 37.5
C04p24020 Brassica napus HOM05D008841 ORTHO05D033590 1.3e-06 57.0 51 51.0
Nitab4.5_0001115g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.3e-06 57.0 91 30.8
Oeu059997.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-06 57.0 62 40.3
THA.LOC104809151 Tarenaya hassleriana HOM05D010278 ORTHO05D012429 1.3e-06 57.0 97 36.1
BolC3t20214H Brassica oleracea HOM05D007774 ORTHO05D000309 1.7e-06 56.6 55 47.3
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 2.3e-06 56.2 66 34.8
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-06 56.2 67 40.3
Oeu032843.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-06 56.2 62 40.3
Oeu039924.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-06 56.2 67 35.8
Oeu000700.1 Olea europaea HOM05D000017 ORTHO05D000013 2.9e-06 55.8 62 40.3
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 3.8e-06 55.5 68 35.3
Oeu048855.1 Olea europaea HOM05D000017 ORTHO05D000013 5.0e-06 55.1 66 34.8
Atru.chr4.976 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 62 33.9
Atru.chr8.859 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 67 37.3
Atru.chr9.134 Acer truncatum HOM05D000017 ORTHO05D000013 6.6e-06 54.7 98 33.7
BolC2t07487H Brassica oleracea HOM05D007774 ORTHO05D000309 6.6e-06 54.7 55 45.5
CANSAT11G1017 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 54.7 127 26.8
CANSAT56G2397 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 54.7 51 51.0
CANSAT64G0496 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 54.7 127 26.8
Oeu061303.1 Olea europaea HOM05D000017 ORTHO05D000013 6.6e-06 54.7 63 38.1
CANSAT56G0213 Cannabis sativa HOM05D000017 ORTHO05D000013 8.6e-06 54.3 72 36.1
Oeu025042.1 Olea europaea HOM05D000017 ORTHO05D000013 8.6e-06 54.3 67 41.8


User provided reference genes

Program Settings