Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.3e-111 406.4 198 100.0
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 4.6e-109 397.9 198 98.5
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 4.6e-109 397.9 198 98.5
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-104 383.3 198 95.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.2e-104 383.3 198 95.5
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.7e-95 352.8 199 88.9
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.1e-94 350.1 193 88.1
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.1e-94 350.1 193 88.1
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.4e-94 349.7 198 86.9
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 7.6e-88 327.4 189 85.2
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.1e-86 323.6 199 80.9
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 2.4e-86 322.4 182 85.7
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 3.2e-86 322.0 182 85.7
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 4.2e-86 321.6 193 82.4
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.2e-85 320.1 182 84.6
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.6e-85 319.7 196 78.1
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 2.3e-84 315.8 182 84.1
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 8.7e-84 313.9 182 83.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 3.3e-83 312.0 196 80.1
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.0e-80 302.8 181 76.8
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 6.2e-66 254.6 190 63.7
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 8.1e-66 254.2 187 64.7
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 2.4e-65 252.7 169 67.5
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 2.4e-65 252.7 195 62.6
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 6.9e-65 251.1 198 62.6
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 6.9e-65 251.1 190 64.2
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 2.0e-64 249.6 196 57.7
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 4.5e-64 248.4 189 62.4
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.3e-63 246.9 164 68.9
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.2e-63 246.1 188 62.2
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 6.5e-63 244.6 196 61.7
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 8.4e-63 244.2 175 63.4
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 8.4e-63 244.2 191 62.8
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 8.4e-63 244.2 191 62.8
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.5e-62 242.7 188 61.2
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 2.5e-62 242.7 184 62.5
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 3.2e-62 242.3 195 60.5
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 5.5e-62 241.5 185 60.5
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 7.1e-62 241.1 183 63.4
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 9.3e-62 240.7 193 60.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 9.3e-62 240.7 195 60.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.6e-61 240.0 182 62.1
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 3.5e-61 238.8 185 61.6
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 6.0e-61 238.0 195 59.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 6.0e-61 238.0 192 60.9
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 7.9e-61 237.7 182 61.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 7.9e-61 237.7 191 60.2
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.0e-60 237.3 182 62.1
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 1.0e-60 237.3 160 67.5
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.3e-60 236.9 191 60.7
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.3e-60 236.9 191 61.8
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.8e-60 236.5 191 61.3
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.8e-60 236.5 183 62.8
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.8e-60 236.5 183 64.5
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 3.0e-60 235.7 195 65.6
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 5.1e-60 235.0 182 63.2
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 6.7e-60 234.6 189 62.4
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 8.7e-60 234.2 183 60.1
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 8.7e-60 234.2 176 61.9
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 1.5e-59 233.4 178 61.8
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.5e-59 233.4 187 61.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.9e-59 233.0 163 65.6
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.5e-59 232.6 182 62.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 2.5e-59 232.6 185 59.5
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 3.3e-59 232.3 183 61.2
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 9.6e-59 230.7 182 59.9
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.8e-58 228.4 182 63.2
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 6.3e-58 228.0 180 58.3
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 6.3e-58 228.0 191 57.6
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 6.3e-58 228.0 181 60.2
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 6.3e-58 228.0 189 57.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.1e-57 227.3 177 59.3
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.4e-57 226.9 182 59.3
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 3.1e-57 225.7 186 57.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 5.3e-57 224.9 176 60.2
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 5.3e-57 224.9 182 61.5
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 6.9e-57 224.6 180 57.8
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.2e-56 223.8 177 59.3
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.2e-56 223.8 177 58.8
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.5e-56 223.4 189 59.3
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.0e-56 223.0 177 58.8
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.0e-56 223.0 150 64.7
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 2.6e-56 222.6 180 57.2
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.6e-56 221.1 186 54.8
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 7.6e-56 221.1 150 64.7
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.7e-55 219.9 186 54.3
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.8e-55 218.8 150 64.7
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 6.5e-55 218.0 184 57.6
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.5e-55 218.0 176 59.1
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 8.4e-55 217.6 187 54.0
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 8.4e-55 217.6 189 57.1
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 1.2e-53 213.8 152 61.8
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 2.7e-53 212.6 196 52.0
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.0e-52 210.7 182 56.0
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 3.0e-52 209.1 149 62.4
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 3.0e-52 209.1 180 53.3
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 3.9e-52 208.8 157 61.1
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.5e-51 206.1 204 49.5
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 4.3e-51 205.3 207 51.2
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 7.4e-51 204.5 209 50.2
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.6e-50 203.4 207 49.3
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 4.8e-50 201.8 152 60.5
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 6.3e-50 201.4 219 52.5
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 1.8e-49 199.9 180 57.2
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.8e-49 199.9 182 53.8
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.4e-49 199.5 157 59.9
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 7.2e-46 188.0 165 55.2
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 7.9e-45 184.5 185 48.6
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 6.7e-44 181.4 198 49.0
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 5.7e-43 178.3 163 52.1
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.8e-42 176.0 159 51.6
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 8.5e-39 164.5 151 55.6
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 9.7e-35 151.0 118 61.9
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.7e-34 149.1 155 45.2
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.7e-34 149.1 155 45.2
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 4.8e-34 148.7 119 60.5
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.8e-33 146.7 111 59.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.6e-32 143.7 159 51.6
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.6e-32 142.9 150 44.0
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.9e-32 141.7 94 69.1
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 4.2e-30 135.6 126 55.6
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 4.0e-28 129.0 96 61.5
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 7.5e-27 124.8 153 40.5
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.3e-18 97.4 70 60.0
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.7e-18 97.1 156 31.4
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 2.8e-18 96.3 86 48.8
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 3.7e-18 95.9 73 58.9
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 8.3e-18 94.7 71 60.6
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 7.7e-16 88.2 74 54.1
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.9e-15 86.3 84 48.8
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 3.8e-15 85.9 67 58.2
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 3.6e-13 79.3 73 57.5
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 2.6e-11 73.2 63 54.0
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 1.3e-10 70.9 72 54.2
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 2.2e-10 70.1 143 22.4


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