Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 6.2e-60 233.8 107 100.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 4.9e-57 224.2 107 94.4
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 4.9e-57 224.2 107 94.4
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-54 216.1 107 90.7
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 2.3e-51 205.3 108 87.0
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-49 199.5 107 86.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 8.3e-49 196.8 105 82.9
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 2.4e-48 195.3 103 84.5
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.7e-47 191.8 105 81.0
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.5e-47 191.4 102 83.3
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 8.6e-46 186.8 103 81.6
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 7.3e-45 183.7 103 78.6
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.0e-43 177.9 101 76.2
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.4e-42 174.5 105 76.2
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 7.6e-42 173.7 102 75.5
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.9e-41 171.8 102 77.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.9e-41 171.8 108 74.1
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.9e-41 171.8 102 77.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.9e-41 171.8 108 74.1
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.4e-40 169.5 101 74.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 9.2e-40 166.8 101 67.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.2e-39 166.4 101 68.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-39 166.4 101 68.3
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-39 166.4 101 68.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.2e-39 166.4 101 68.3
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 1.0e-38 163.3 101 68.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.0e-38 163.3 101 67.3
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.0e-38 163.3 101 67.3
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.3e-38 162.2 101 67.3
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 64.4
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.1e-37 159.8 98 67.3
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 65.3
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 66.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.5e-37 158.7 102 64.7
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.3e-37 157.9 98 66.3
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 4.3e-37 157.9 98 66.3
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 5.6e-37 157.5 96 68.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 5.6e-37 157.5 99 66.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 7.3e-37 157.1 100 65.0
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.2e-36 156.4 101 65.3
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.2e-36 156.4 101 65.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.6e-36 156.0 101 63.4
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 4.7e-36 154.5 101 64.4
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.1e-35 153.3 94 67.0
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 1.4e-35 152.9 99 65.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.4e-35 152.9 101 64.4
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.0e-35 151.4 105 61.9
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 6.9e-35 150.6 105 61.0
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 9.0e-35 150.2 104 63.5
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 9.0e-35 150.2 101 60.4
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.2e-34 149.8 106 61.3
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.2e-34 149.8 106 60.4
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.5e-34 149.4 91 69.2
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.0e-34 149.1 100 61.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.0e-34 149.1 100 61.0
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 4.4e-34 147.9 90 67.8
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.4e-34 147.9 102 61.8
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.8e-34 147.5 104 61.5
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.7e-33 146.0 101 60.4
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.2e-33 145.6 105 59.0
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 6.4e-33 144.1 101 59.4
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 8.4e-33 143.7 100 57.0
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 5.4e-32 141.0 100 60.0
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 7.1e-32 140.6 101 56.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.7e-31 138.7 91 61.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.5e-31 138.3 90 63.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.7e-30 136.0 86 66.3
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.9e-30 134.8 98 61.2
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.6e-30 134.0 89 62.9
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 6.6e-30 134.0 67 79.1
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 8.7e-30 133.7 87 62.1
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.3e-28 129.8 98 60.2
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 4.8e-28 127.9 100 51.0
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.8e-27 125.9 99 53.5
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.0e-27 124.8 98 56.1
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 6.9e-27 124.0 62 77.4
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.5e-26 122.9 101 51.5
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.5e-26 122.9 89 58.4
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.0e-26 122.5 101 53.5
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 2.6e-26 122.1 99 51.5
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.6e-26 122.1 98 57.1
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.6e-26 122.1 98 57.1
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 3.4e-26 121.7 100 52.0
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 5.8e-26 120.9 102 51.0
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.9e-25 118.6 87 58.6
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 8.4e-25 117.1 84 59.5
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 8.4e-25 117.1 99 53.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.4e-24 116.3 88 55.7
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.4e-24 115.5 98 52.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 4.2e-24 114.8 100 47.0
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 5.4e-24 114.4 79 58.2
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.2e-23 113.2 118 45.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.7e-23 112.1 63 69.8
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 6.0e-23 110.9 98 51.0
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 6.0e-23 110.9 89 53.9
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.0e-22 110.2 93 54.8
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.8e-22 109.4 91 46.2
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 2.3e-22 109.0 97 51.5
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 3.9e-22 108.2 61 70.5
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 6.7e-22 107.5 92 51.1
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 6.7e-22 107.5 98 51.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 2.5e-21 105.5 107 44.9
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.1e-20 102.4 103 45.6
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.1e-19 100.1 111 42.3
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.8e-19 99.4 48 79.2
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 5.8e-18 94.4 49 79.6
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.3e-17 93.2 86 48.8
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.7e-12 75.1 87 37.9
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 5.5e-08 61.2 97 34.0


User provided reference genes

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